| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1493716 = | 61 (1.020) | 4 (0.070) | 4/228 | NT | 6.6% | coding (1162/2277 nt) | PP_1306 | Pyocin S‑type killer domain‑containing protein |
| ? | NC_002947 | 1493747 = | 55 (0.970) | coding (1131/2277 nt) | PP_1306 | Pyocin S‑type killer domain‑containing protein | |||||
GCTAACCGAATCGATCAGATTCCTGGGGGTATATGCAGGTGCCACGCAGAACCTGATGCAGCGCGCGGCTGAAGTGGAAAACCTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1493867‑1493716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGTGGCACCTGCATATACCCCCAGGAATCTGATCGATTCGGTTAGCGCCAGTGCCAGGTGGTATTCCTGCCAG > NC_002947/1493747‑1493894 GCTAAGCGAATCGATTAGATTGCTGGGGGTATATGCAGGTGCCACGCAGAACCTGATGCCGCGCGCGGCTGAAGTGGAGAACCTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGC > 2:340342/1‑150 CTAACCGAATCGATCAGATTCCTGGGGGTATATGCAGGTGCCACGCAGAACCTGATGCAGCGCGCGGCTGAAGTGTAAAACCTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCT < 2:717825/150‑1 ATCAGATTCCTGGGGGTATATGCAGGTGCCACGCAGAACCTGATGCAGCGCGCGGCTGAAGTGGAAAACCTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCT < 1:714066/138‑1 ATCAGATTCCTGGGGGTATATGCAGGTGCCACGCAGAACCTGATGCAGCGCGCGGCTGAAGTGGAAAACCTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCT > 2:714066/1‑138 CTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCT < 1:961496/69‑1 CTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCT > 2:961496/1‑69 TGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCTGGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGTGGCACCTGCATATACCCCCAGGAATCTGATCGAT > 2:428453/1‑150 GCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCTGGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGT < 1:1303178/115‑1 GCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCTGGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGT > 2:1303178/1‑115 CGAAGCCGAACGCTTGGCTGCTGGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGTGGCACCTGCATATACCCCCAGGAATCTGATCGATTCGGTTAGCGCCAGT < 1:428453/150‑1 GCTGGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGTGGCACCTGCATATACCCCCAGGAATCTGATCGATTCGGTTAGCGCCAGTGCCAGGTGGTATTCCTGCC < 2:1438457/150‑1 TGGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGTGGCACCTGCATATACCCCCAGGAATCTGATCGATTGTGTTAGCGCCAGTGCCAGGTGGTATTACTGCCAG > 2:544026/1‑150 GCTAACCGAATCGATCAGATTCCTGGGGGTATATGCAGGTGCCACGCAGAACCTGATGCAGCGCGCGGCTGAAGTGGAAAACCTCCAGGCTCAACTCGCTGCACAGGAAGAAGCTGCACGCCAGCAGGCCGAAGCCGAACGCTTGGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1493867‑1493716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgGCGTGCAGCTTCTTCCTGTGCAGCGAGTTGAGCCTGGAGGTTTTCCACTTCAGCCGCGCGCTGCATCAGGTTCTGCGTGGCACCTGCATATACCCCCAGGAATCTGATCGATTCGGTTAGCGCCAGTGCCAGGTGGTATTCCTGCCAG > NC_002947/1493747‑1493894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |