| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1594437 = | 59 (0.990) | 6 (0.100) | 6/232 | NT | 9.8% | coding (1028/1320 nt) | kgtP | alpha‑ketoglutarate permease |
| ? | NC_002947 | 1594464 = | 54 (0.930) | coding (1001/1320 nt) | kgtP | alpha‑ketoglutarate permease | |||||
GGTCTGTCCGACAAGATCGGCCGCCGTCCGATCCTGATCGCCTTCGGTGTGCTCGGCACCCTGTTCACCGTCCCCATCCTCAGCACCCTGCACACCATCCAGACCTGG‑TGGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1594552‑1594437‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTC > NC_002947/1594464‑1594610 GGTCTGTCCGACAAGATCGGCCGCCGTCCGATCCTGATCGCCTTCGGTGTGCTCGGCACCCTGTTCACCGTCCCCATCCTCAGCACCCTGCACCCCA‑CCAGGTCTGGATGGTGTGCAGGGTG < 1:1492602/122‑1GGTCTGTCCGACAAGATCGGCCGCCGTCCGATCCTGATCGCCTTCGGTGTGCTCGGCACCCTGTTCACCGTCCCCATCCTCAGCACCCTGCACCCCA‑CCAGGTCTGGATGGTGTGCAGGGTG > 2:1492602/1‑122 CACACCATCCAGACCTGG‑TGGGGTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAA > 1:1397122/1‑73 CACACCATCCAGACCTGG‑TGGGGTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAA < 2:1397122/73‑1 ACACCATCCAGACCTGG‑TGGGGTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCG > 1:71273/1‑76 ACACCATCCAGACCTGG‑TGGGGTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCG < 2:71273/76‑1 gtggGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTG < 2:626199/146‑1 GTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGT < 1:1246798/147‑1 GTGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGT > 2:1246798/1‑147 TGCAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTC > 2:742582/1‑150 GGTCTGTCCGACAAGATCGGCCGCCGTCCGATCCTGATCGCCTTCGGTGTGCTCGGCACCCTGTTCACCGTCCCCATCCTCAGCACCCTGCACACCATCCAGACCTGG‑TGGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1594552‑1594437‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcAGGGTGCTGAGGATGGGGACGGTGAACAGGGTGCCGAGCACACCGAAGGCGATCAGGATCGGACGGCGGCCGATCTTGTCGGACAGACCACCGATCATCGGCTGCAGGCACATGAACAGGAACAGCGTGGCGGCCGAGATGGTGGTC > NC_002947/1594464‑1594610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |