New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1600503	77 (1.290)	5 (0.090)	3/230	NT	6.1%	coding (723/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase
	?	NC_002947	= 1600523	80 (1.390)					coding (703/2292 nt)	bglX	beta‑D‑glucoside glucohydrolase

CACCATCACGCCACCGGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1600482‑1600503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccc‑TATCGCGCCGC‑GCTCGATGCGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGGCGTGACCATCAGCGACCA  <  NC_002947/1600523‑1600378                                                                                                                                                                            CACCATCACGCCACCGGCACCCGCATCGAG‑CGCGGCGCGAT‑AGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGG                    >  2:1377920/1‑150    CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGCGG                                                                                                                              <  1:129198/41‑1    CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGCGG                                                                                                                              <  1:949419/41‑1    CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGCGG                                                                                                                              >  2:129198/1‑41    CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGAGG                                                                                                                              >  2:949419/1‑41                   ACCC‑TATCGCGCCGC‑GCTCGATGCGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGGCGTGACCATCAGCGACCA  >  1:268288/1‑150                                                                                                                                                                            CACCATCACGCCACCGGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1600482‑1600503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccc‑TATCGCGCCGC‑GCTCGATGCGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGGCGTGACCATCAGCGACCA  <  NC_002947/1600523‑1600378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.