New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1612894 =	54 (0.900)	5 (0.090)	5/220	NT	10.1%	coding (649/693 nt)	ung	uracil‑DNA glycosylase
	?	NC_002947	1612936 =	40 (0.730)					coding (691/693 nt)	ung	uracil‑DNA glycosylase

GCCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1613051‑1612894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctgTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGGCGT  >  NC_002947/1612936‑1613082                                                                                                                                                                                                                                                                                                                   GCCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGC                                                                                                                                                             <  1:1358032/150‑1  CCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC                                                                                                                                                            <  2:1567607/150‑1                                                                                                          GCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGC                                                                                                                                                       >  2:1409504/1‑51                                                                                                          GCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGC                                                                                                                                                       <  1:1409504/51‑1                                                                                                                  TCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC                                            <  1:121620/150‑1                                                                                                                  TCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC                                            >  2:121620/1‑150                                                                                                                    ACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCACTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGG                                                                                                <  2:1320653/96‑1                                                                                                                    ACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCACTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGG                                                                                                >  1:1320653/1‑96                                                                                                                      AGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCA                                        >  2:1355957/1‑150                                                                                                                                                       CCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGC                                                                                                  >  1:499589/1‑59                                                                                                                                                       CCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGC                                                                                                  <  2:499589/59‑1                                                                                                                                                        CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTG      <  1:643205/150‑1                                                                                                                                                        CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTG      >  2:1562862/1‑150                                                                                                                                                        CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGGCGGTGATGCCGGTGTCCTG      <  2:965495/150‑1                                                                                                                                                        CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC                                            >  2:1188416/1‑112                                                                                                                                                        CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC                                            <  1:1188416/112‑1                                                                                                                                                            CTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGGCGT  <  2:577876/150‑1                                                                                                                                                                                                                                                                                                                   GCCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1613051‑1612894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctgTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGGCGT  >  NC_002947/1612936‑1613082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.