| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1656736 | 67 (1.120) | 4 (0.070) | 4/222 | NT | 6.2% | coding (75/4527 nt) | PP_1449 | hypothetical protein |
| ? | NC_002947 | = 1656757 | 59 (1.070) | coding (54/4527 nt) | PP_1449 | hypothetical protein | |||||
GCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1656581‑1656736‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgggcAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGACATCGTGCCGCCCAACGCCACGGGGCTGTCA < NC_002947/1656757‑1656610 GCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCG > 1:135890/1‑150 AACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCT < 2:135890/150‑1 AACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCT > 2:1547828/1‑150 ACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTG < 1:671425/150‑1 CGTTGTAGTCGATGAACTGGTTTTGTGACATCCCCGTTGCGTTTGGCGGCACTATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGTGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGG < 2:1156637/150‑1 CGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGG < 2:473006/150‑1 CGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGG < 1:838475/150‑1 TTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGC > 2:1065136/1‑150 GTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCAATCTTCCTCGCCGTGCTCGGG < 1:1116231/150‑1 GTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGG < 1:1547828/150‑1 CTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCA > 1:1419200/1‑61 CTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCA < 2:1419200/61‑1 CGCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGACATCGTGCCGCCCAACGCCACGGGG < 2:310765/150‑1 GCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCG > 1:320208/1‑116 GCTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCG < 2:320208/116‑1 CTGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGACATCGTGCCGCCCAACGCCACGGGGCT < 1:1314807/150‑1 TGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGGCCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGCCATAGTGCCGCCCAACGCCACGGGGCTG > 1:619083/1‑150 TGGGCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGCCCACGGGGTGCCGGTCATCGACATCGTTCCGCCCAACGCCACGGGGCTG < 2:879082/150‑1 GCAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGACATCGTGCCGCCCAACGCCACGGGGCTGTCA < 2:1533857/150‑1 GCAACGTTGTAGTCGATGAACTGGTTGTGTGACAGCCCCGTGGCGTTGGGCGGCACGATGTCGATGACCGGCACCCCGTGGCCGTTATGGATGACCGGGGTCCCCCCGGGGCCGCTGGCTGCTTCCAGTCCTGTCTGAGCCAGTGCGGCGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1656581‑1656736‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgggcAATCTTCCTCGCCGTGCTCGGGCCCAGCGCCGCACTGGCTCAGACAGGACTGGAAGCAGCCAGCGGCCCCGGGGGGACCCCGGTCATCCATAACGGCCACGGGGTGCCGGTCATCGACATCGTGCCGCCCAACGCCACGGGGCTGTCA < NC_002947/1656757‑1656610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |