| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1701613 = | 71 (1.190) | 4 (0.070) | 4/222 | NT | 5.9% | intergenic (+16/‑78) | prfB/lysS | peptide chain release factor 2/lysine‑‑tRNA ligase |
| ? | NC_002947 | 1701643 = | 62 (1.120) | intergenic (+46/‑48) | prfB/lysS | peptide chain release factor 2/lysine‑‑tRNA ligase | |||||
GCAAGTTTTTCCTTGCGCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAGGTAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1701770‑1701613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtagcgcgTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGCCGCCGAGCGTGCCAAGGGC > NC_002947/1701643‑1701789 GCAAGTTTTTCCTTGCGCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAG < 1:493061/150‑1 AAGTTTTTCCTTGCGCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAGGT > 2:175427/1‑150 TTCCTTGCGCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAGGTAGCGCG < 2:532478/150‑1 GCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAGG > 1:1176278/1‑135 GCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAGG < 2:1176278/135‑1 ACGCGCTACCGGCGGCTGGCCAGGTAGCGCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCG > 1:1400466/1‑98 ACGCGCTACCGGCGGCTGGCCAGGTAGCGCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCG < 2:1400466/98‑1 CGCGCTACCGGCGGCTGGCCAGGTAGCGCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGAC > 1:1029190/1‑75 CGCGCTACCGGCGGCTGGCCAGGTAGCGCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGAC < 2:1029190/75‑1 GCGCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGCCGCCGAGCGTGCCAAGG < 1:1038479/150‑1 CGCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGCCGCCGAGCGTGCCAAGGG < 2:1019405/150‑1 GCGTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGCCGCCGAGCGTGCCAAGGGC < 2:1217613/150‑1 GCAAGTTTTTCCTTGCGCAGGGCGATCAGGGCGTTTTCTTCCTGTTGCAGGTCTTGCGATTCGGTCTTGAGGTCGCTCATGTCGTCATTCTTTCCATCAGGTATTCGTTGCCCGTTCCGGGCAGGGCACGCGCTACCGGCGGCTGGCCAGGTAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1701770‑1701613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtagcgcgTGCCCTGCCCGGAACGGGCAACGAATACCTGATGGAAAGAATGACGACATGAGCGACCTCAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGCCGCCGAGCGTGCCAAGGGC > NC_002947/1701643‑1701789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |