New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1744332 = | 55 (0.920) | 3 (0.050) | 3/226 | NT | 5.5% | coding (585/597 nt) | PP_1542 | hypothetical protein |
? | NC_002947 | 1744377 = | 52 (0.920) | coding (540/597 nt) | PP_1542 | hypothetical protein |
AACATCGCCGGCCTACCCGTTTCGCGCACTGGTCGCCCTACGAGACTCTTGAGGTCGCCGGCGAGTGGGCACCGACCATAAAAGCGGCCAAGGCCAGCTACAAAGAAGCGCTTCGGCTGCACCAGGCCAAGGGCCGAGCAGACAAGAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1744483‑1744332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagcgcTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGACCAGTGCGCGAAACGGGTAGGCCGGCGATGTTCGAAGTAGGCGCTACCGCGTGGGTAGCGGACCATCCGGTATT > NC_002947/1744377‑1744525 AACATCGCCGGCCTACCCGTTTCGCGCACTGGTCGCCCTACGAGACTCTTGAGGTCGCCGGCGAGTGGGCACCGACCATAAAAGCGGCCAAGGCCAGCTACAAAGAAGCGCTTCGGCTGCACCAGGCCAAGGGCCGAGCAGACAAGAAGC > 2:310429/1‑150 CATCGCCGGCCTACCCGTTTCGCGCACTGGTCGCCCTACGAGACTCTTGAGGTCGCCGGCGAGTGGGCACCGACCATAAAAGCGGCCAAGGCCAGCTACAAAGAAGCGCTTCGGCTGCACCAGGACAAGGGCCGAGCAGACAAGAATCGC < 2:1593923/150‑1 AAAGAAGCGCTTCGGCTGCACCAGGCCAAGGGCCGAGCAGACAAGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGACCAGTGCGCGAAACGGGTAGGCCG > 2:966641/1‑150 AAGAAGCGCTTCGGCTGCACCAGGCCAAGGGCCGAGCAGACAAGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGT > 1:752920/1‑118 AAGAAGCGCTTCGGCTGCACCAGGCCAAGGGCCGAGCAGACAAGAAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGT < 2:752920/118‑1 AAGCGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGACCAGTGCGCGAAACGGGTAGGCCGGCGACGTTCGAAGTAGGCGCTACCGCGTGGGTAGCGGACCATCCG < 1:1573572/150‑1 CGCTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGACCAGTGCGCGAAACGGGTAGGCCGGCGATGTTCGAAGTAGGCGCTACCGCGTGGGTAGCGGACCATCCGGTA < 2:691281/150‑1 CTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGAGACCAGTGCGCGAAACGGATAGAACGGCATTGTGCATAGTAGGCTCTACCGCGTGGGTAGCGGACCATCCGGTATT > 1:1599993/1‑150 AACATCGCCGGCCTACCCGTTTCGCGCACTGGTCGCCCTACGAGACTCTTGAGGTCGCCGGCGAGTGGGCACCGACCATAAAAGCGGCCAAGGCCAGCTACAAAGAAGCGCTTCGGCTGCACCAGGCCAAGGGCCGAGCAGACAAGAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1744483‑1744332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagcgcTTCTTTGTAGCTGGCCTTGGCCGCTTTTATGGTCGGTGCCCACTCGCCGGCGACCTCAAGAGTCTCGTAGGGCGACCAGTGCGCGAAACGGGTAGGCCGGCGATGTTCGAAGTAGGCGCTACCGCGTGGGTAGCGGACCATCCGGTATT > NC_002947/1744377‑1744525 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |