| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2119838 = | 54 (0.900) | 6 (0.100) | 5/232 | NT | 10.6% | coding (946/2355 nt) | PP_1885 | hypothetical protein |
| ? | NC_002947 | 2119861 = | 49 (0.850) | coding (969/2355 nt) | PP_1885 | hypothetical protein | |||||
TGTTGGCTTGGGCTTGTAGGTGAAGGTCAGCGTGCAATGGGACTTCCAGTGCTGGCGGACCTCATCGTGTTCAAAGGTGACACTCAGAAGGGGCTGAAAATCCGCCAGGGCAGCCCGCGCCTGATCGCTGGCCGGGGCCCCTGCGTCCACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2119990‑2119838‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACAGCCGAA > NC_002947/2119861‑2120009 TGTTGGCTTGGGCTTGTAGGTGAAGGTCAGCGTGCAATGGGACTTCCAGTGCTGGCGGACCTCATCGTGTTCAAAGGTGACACTCAGAAGGGGCTGAAAATCCGCCAGGGCAGCCCGCGCCTGATCGCTGGCCGGGGCCCCTGCGTCCAC < 1:1201831/150‑1TGTTGGCTTGGGCTTGTAGGTGAAGGTCAGCGTGCAATGGGACTTCCAGTGCTGGCGGACCTCATCGTGTTCAAAGGTGACACTCAGAAGGGGCTGAAAATCCGCCAGGGCAGCCCGCGCCTGATCGCTGGCCGGGGCCCCTGCGTCCAC > 2:1161950/1‑150 GCTGGCCGGGGCCCCTGCGTCCACGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCA < 1:971604/125‑1 GCTGGCCGGGGCCCCTGCGTCCACGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCA > 2:971604/1‑125 TGGCCGGGGCCCCTGCGTCCACGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAA < 1:1426703/86‑1 TGGCCGGGGCCCCTGCGTCCACGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAA > 2:1426703/1‑86 GCCGGGGCCCCTGCGTCCACGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAA < 1:781276/84‑1 GCCGGGGCCCCTGCGTCCACGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAA > 2:781276/1‑84 CCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACAGCCGAA < 1:296019/150‑1 TGTTGGCTTGGGCTTGTAGGTGAAGGTCAGCGTGCAATGGGACTTCCAGTGCTGGCGGACCTCATCGTGTTCAAAGGTGACACTCAGAAGGGGCTGAAAATCCGCCAGGGCAGCCCGCGCCTGATCGCTGGCCGGGGCCCCTGCGTCCACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2119990‑2119838‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACAGCCGAA > NC_002947/2119861‑2120009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |