| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2275684 = | 74 (1.240) | 8 (0.150) | 7/220 | NT | 11.4% | intergenic (‑152/+37) | PP_2005/PP_2006 | hypothetical protein/membrane protein |
| ? | NC_002947 | 2275709 = | 56 (1.020) | intergenic (‑177/+12) | PP_2005/PP_2006 | hypothetical protein/membrane protein | |||||
TGCCTTTGTCCTGACCGACATCACCTACTCCGGTGCCCTGATATTCGGTGGCTCGCTGAAGTTGCTCGAGAAATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑TCAACGCCCGGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2275841‑2275684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggggttGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATTTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAGGACAAAGGCATCCGGTTCAC > NC_002947/2275709‑2275851 TGCCTTTGTCCTGACCGACATCACCTACTCCGGTGCCCTGATATTCGGTGGCTCGCTGAAGTTGCTCGAGAAATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑TCAACGC < 1:421262/150‑1 TGATATTCGGTGGCTCGCTGAAGTTGCTCGAGAAATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAAC‑GAACCCCGGGCGTTGA‑GCCCGGGGTTGTGTTGGCAGG < 2:869718/130‑1 TGATATTCGGTGGCTCGCTGAAGTTGCTCGAGAAATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAAC‑GAACCCCGGGC‑GTTGAGCCCGGGGTTGTGTTGGCAGG > 1:869718/1‑130 AATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑GTTGAGCCCGGGGTTGTGTTGGCAGG > 1:390748/1‑98 AATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑GTTGAGCCCGGGGTTGTGTTGGCAGG < 2:390748/98‑1 CAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑TCAACGCCCG > 1:1496996/1‑66 CAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑TCAACGCCCG < 2:1496996/66‑1 AACCCCGGGC‑TCAACGCCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTC < 2:952694/73‑1 AACCCCGGGC‑TCAACGCCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTC > 1:952694/1‑73 ACCCCGGGC‑TCAACGCCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTT > 1:880235/1‑69 ACCCCGGGC‑TCAACGCCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTT < 2:880235/69‑1 CCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATTTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAGGACAAAGGCATCCGGTTC > 1:846591/1‑150 CCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATTTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAGGACAAAGGCATCCGGTTC > 1:796168/1‑150 CCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATCTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAG > 2:1092888/1‑132 CCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATCTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAG < 1:1092888/132‑1 CCCGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGGTTGTCCTGGATGCAGAATTTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAGGACAAAGGCATCCGGTTC > 2:513472/1‑150 CGGGGTTGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATTTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAGGACAAAGGCATCCGGTTCAC > 1:1163744/1‑150 TGCCTTTGTCCTGACCGACATCACCTACTCCGGTGCCCTGATATTCGGTGGCTCGCTGAAGTTGCTCGAGAAATTCTGCATCCAGGACAAACGTCTCGCCCTGGCGACGCTGGCCGCCTGACCCTGCCAACACAACCCCGGGC‑TCAACGCCCGGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2275841‑2275684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggggttGTGTTGGCAGGGTCAGGCGGCCAGCGTCGCCAGGGCGAGACGTTTGTCCTGGATGCAGAATTTCTCGAGCAACTTCAGCGAGCCACCGAATATCAGGGCACCGGAGTAGGTGATGTCGGTCAGGACAAAGGCATCCGGTTCAC > NC_002947/2275709‑2275851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |