| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2306464 | 66 (1.100) | 4 (0.070) | 4/230 | NT | 5.2% | coding (136/1719 nt) | PP_2028 | TPR repeat‑containing protein |
| ? | NC_002947 | = 2306542 | 82 (1.430) | coding (58/1719 nt) | PP_2028 | TPR repeat‑containing protein | |||||
TCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2306311‑2306464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtgCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTCCACGGTGTACTGCTGGGTGGCGGCAGCGGCAGCACCAGCAAACTGCCGTGGGTGGCGCTGGGCCTTGCC < NC_002947/2306542‑2306396 TCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGAGCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACAGCAGTTTGCTGGTGCTGCCGCTGCCGGAACCGAGCAGTACAC > 1:743351/1‑150 CAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTG < 2:459857/150‑1 GATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTG > 2:283098/1‑150 CAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCA > 2:1099863/1‑150 CCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTC < 1:1099863/150‑1 GCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTCCACG < 1:283098/150‑1 CCGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCA > 1:273114/1‑61 CCGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCA < 2:273114/61‑1 CGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTCCACGGTGTACTGCTGGGTGGCGGCAGCGGCAGCACCAGCAAACTGCCGTGGGTGGCGCTGGGCCTTGC > 1:1256967/1‑150 CGTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTCCACGGTGTACTGCTGGGTGGCGGCAGCGGCAGCACCAGCAAACTGCCGTGGGTGGCGCTGGGCCTTGC > 2:1400116/1‑150 GTGCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTCCACGGTGTACTGCTGGGTGGCGGCAGCGGCAGCACCAGCAAACTGCCGTGGGTGGCGCTGGGCCTTGCC < 2:1256967/150‑1 TCACCAGCGGGTCGGCCGGGCGCTGACGGCTTTCTTCCAGCCGCTGCCAGCTGGGCCCGAGCAGCGCCAGGATCACCAGTAACCAGGCAAGGCCCAGCGCCACCCACGGCAGTTTGCTGGTGCTGCCGCTGCCGCCACCCAGCAGTACACCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2306311‑2306464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtgCTCGGCTGGCTGCTGTACAAACTGTGGCACCGGCGCAAGCGCGCCGGGCGCTGGCAGATGATTCTGCCGCCAGCCTTCCACGGTGTACTGCTGGGTGGCGGCAGCGGCAGCACCAGCAAACTGCCGTGGGTGGCGCTGGGCCTTGCC < NC_002947/2306542‑2306396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |