| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2334317 | 48 (0.800) | 4 (0.070) | 4/226 | NT | 6.4% | intergenic (+21/+59) | fadA/PP_2052 | 3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase |
| ? | NC_002947 | = 2334368 | 72 (1.280) | intergenic (+72/+8) | fadA/PP_2052 | 3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase | |||||
CCCTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2334162‑2334317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cca‑‑‑‑‑‑‑gcccTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTGGGTACCGGCCTAGAGCACTTCGAACAGGCCCGCTGCGCCCATGCCGCCGCCCACGCACATCGTCACGACCACGTACTTCACCTTAC < NC_002947/2334368‑2334220 CCCTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGC > 1:1430061/1‑150CCCTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGC > 2:321529/1‑150 CCTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCC > 2:672550/1‑150 CCTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGAGGGCCGGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCC > 2:85143/1‑150 CTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA < 2:361861/150‑1 TATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTATAGGCCGGTACCCAAGACCA‑‑‑‑‑‑‑G > 2:921066/1‑150 ATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GC < 1:501153/150‑1 ATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GC < 2:282620/150‑1 TGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GC > 1:1638326/1‑119 TGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GC < 2:1638326/119‑1 acctgAGGTCACGTACGCGGTAGTGACGATGTGCGTGGGCGGCAGCACGGGCGCAGCGGGCCTGTTAGAAGTGCTATAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCA < 2:343326/145‑1 GTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTG < 2:1038802/150‑1 TACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GC > 2:1309429/1‑85 TACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GC < 1:1309429/85‑1 TCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCAGCCCATGGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTG < 1:1048542/150‑1 ACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTATAGGCCGGTACCCAAGAACA‑‑‑‑‑‑‑GCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTGGGTACCGGCCTA < 1:921066/150‑1 CA‑‑‑‑‑‑‑GCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTGG > 2:1574150/1‑70 CA‑‑‑‑‑‑‑GCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTGG < 1:1574150/70‑1 CTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTGGGTACCGGCCTAGAGCACTTCGAACAGGCCCGCTGCGCCCATGCCGCCGCCCACGCACATCGTCACGACCACGTACTTCACCTTAC < 1:335689/150‑1 CCCTATGGCATGAGCGGCGCGCGGATGGTCGGCCATGCCTTGCTGGAGGGCAAGCGACGTAAGGTGAAGTACGTGGTCGTGACGATGTGCGTGGGCGGCGGCATGGGCGCAGCGGGCCTGTTCGAAGTGCTCTAGGCCGGTACCCAAGGCCA‑‑‑‑‑‑‑GCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2334162‑2334317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cca‑‑‑‑‑‑‑gcccTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGCCTTGGGTACCGGCCTAGAGCACTTCGAACAGGCCCGCTGCGCCCATGCCGCCGCCCACGCACATCGTCACGACCACGTACTTCACCTTAC < NC_002947/2334368‑2334220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |