| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2337360 = | 57 (0.950) | 4 (0.070) | 4/222 | NT | 6.4% | coding (745/894 nt) | ybhD | DNA‑binding transcriptional regulator |
| ? | NC_002947 | 2337417 = | 64 (1.160) | coding (688/894 nt) | ybhD | DNA‑binding transcriptional regulator | |||||
GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2337512‑2337360‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgcccaGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG > NC_002947/2337417‑2337563 GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGC > 1:859411/1‑150GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGC < 2:510644/150‑1 CTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCC > 1:960476/1‑150 CTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCC > 1:278841/1‑69 CTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCC < 2:278841/69‑1 CTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAG > 1:700340/1‑104 CTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAG < 2:700340/104‑1 TGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCG < 1:589051/139‑1 TGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCG > 2:589051/1‑139 CCATGCCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGCTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAA > 2:1207679/1‑150 CCCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAG < 2:576310/150‑1 CCAGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG > 2:583977/1‑150 GCCTGAGTGGCAACCGCATGCTGCTGGACCATGCGTTGTCCGGGCTCAACCTGCGGCCCAAGTGGTTCTACGAAGTGCAACACCTGTCCACGTCGCTGGGCATGGTCGAGGCCGGGCTGGGCGTGTCGGCCATGCCCAGCCTGGCCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2337512‑2337360‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgcccaGCGACGTGGACAGGTGTTGCACTTCGTAGAACCACTTGGGCCGCAGGTTGAGCCCGGACAACGCATGGTCCAGCAGCATGCGGTTGCCACTCAGGCGGCCGACGCCGATCAGGCGGTAATCAGCCAGCTCTGTCCAGGTAACGGAGG > NC_002947/2337417‑2337563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |