New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2453208 =	68 (1.140)	4 (0.070)	4/230	NT	5.8%	coding (1954/3450 nt)	mfd	transcription‑repair coupling factor
	?	NC_002947	2453246 =	64 (1.120)					coding (1916/3450 nt)	mfd	transcription‑repair coupling factor

GGACCAGCAGGCCGCCATCGAGGCCGTGCGCGCCGACATGCTGGCACCCAAGCCAATGGACCGCCTGGTCTGTGGCGACGTGGGCTTCGGCAAGACCGAAGTGGCCA‑TGCGCGCGGCGTTCATCGCCGTGCACAGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2453347‑2453208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTGCTGGTCCGGGGTCTCCTCGAACGGGAAGCCGGCGCTGAAGGTGGCGTAGTCAGC  >  NC_002947/2453246‑2453394                                                                                                                                                                                                                                                                                                    GGACCAGCAGGCCGCCATCGAGGCCGTGCGCGCCGACATGCTGGCACCCAAGCCAATGGACCGCCTGGTCTGTGGCGGCGTGGGCTTCGGCAAGACCGAAGTGGCCACTGTGCACGGCGATGAACGCCGCGCGCA‑TGGCCACTTCGGTCT                                                                                                                                             >  1:219538/1‑150    CCAGCAGGCCGCCATCGAGGCCGTGCGCGCCGACATGCTGGCACCCAAGCCAATGGACCGCCTGGTCTGTGGCGGCGTGGGCTTCGGCAAGACCGAAGTGGCCACTGTGCACGGCGATGAACGCCGCGCGCA‑TGGCCACTTCGGTCTTGC                                                                                                                                          <  2:219538/150‑1                                                             CCGCCTGGTCTGTGGCGACGTGGGCTTCGGCAAGACCGAAGTGGCCA‑TGCGCGCGGCGTTCATCGCCGTGCACAGTGGCC                                                                                                                                                       <  2:1349702/80‑1                                                             CCGCCTGGTCTGTGGCGACGGGGGCTTCGGCAAGACCGAAGTGGCCA‑TGCGCGCGGCGTTCATCGCCGTGCACAGTGGCt                                                                                                                                                       >  1:1349702/1‑79                                                                                                          CA‑TGCGCGCGGCGTTCATCGCCGTGCACAGTGGCCACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTG                                                        <  1:1267428/130‑1                                                                                                          CA‑TGCGCGCGGCGTTCATCGCCGTGCACAGTGGCCACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTG                                                        >  2:1267428/1‑130                                                                                                                                         TGGCCACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTGCTGGTCCGGGGTCTCCTCGAACGGGAAGCCGGCGCTGAAGGTGGCGTAGT      <  1:1376684/150‑1                                                                                                                                          GGCCACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTGCTGGTCCGGGGTCTCCTCGAACGGGAAGCCGGCGCTGAAGGTGGCGTAGTC     >  2:567541/1‑150                                                                                                                                             CACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTGCTGGTCCGGGGTCTCCTCGAACGGGAAGCCGGCGCTGAAGGTGGCGTAGTCAGC  >  2:186147/1‑150                                                                                                                                                                                                                                                                                                    GGACCAGCAGGCCGCCATCGAGGCCGTGCGCGCCGACATGCTGGCACCCAAGCCAATGGACCGCCTGGTCTGTGGCGACGTGGGCTTCGGCAAGACCGAAGTGGCCA‑TGCGCGCGGCGTTCATCGCCGTGCACAGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2453347‑2453208 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccACTTCGGTCTTGCCGAAGCCCACGTCGCCACAGACCAGGCGGTCCATTGGCTTGGGTGCCAGCATGTCGGCGCGCACGGCCTCGATGGCGGCCTGCTGGTCCGGGGTCTCCTCGAACGGGAAGCCGGCGCTGAAGGTGGCGTAGTCAGC  >  NC_002947/2453246‑2453394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.