| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2720458 = | 76 (1.270) | 4 (0.070) | 4/230 | NT | 5.2% | coding (152/483 nt) | PP_2380 | hypothetical protein |
| ? | NC_002947 | 2720479 = | 72 (1.250) | coding (173/483 nt) | PP_2380 | hypothetical protein | |||||
CCATCACGTCACCGTTCATGGTCATCTCGTGCACCTGCACGGTCTTGGCCACGGGCGAAGCCACGCCCACCAGCTTGCTGTCGCTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2720547‑2720458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGATGACCATGAACGGTGACGTGATGGGCATGCGTGAGGTCAAGGCTATCGAATTGCCAGCCGGCAAGGCAGT > NC_002947/2720479‑2720593 CCATCACGTCACCGTTCATGGTCATCTCGTGCACCTGCACGGTCTTGGCCACGGGCGAAGCCACGCCCACCAGCTTGCTGTCGCTGCTG < 1:1166282/89‑1CCATCACGTCACCGTTCATGGTCATCTCGTGCACCTGCACGGTCTTGGCCACGGGCGAAGCCACGCCCACCAGCTTGCTGTCGCTGCTG > 2:1166282/1‑89 GAAGCCACGCCCACCAGCTTGCTGTCGCTGCTGGTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGATGA > 1:917997/1‑82 GAAGCCACGCCCACCAGCTTGCTGTCGCTGCTGGTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGATGA < 2:917997/82‑1 ACGCCCACCAGCTTGCTGTCGCTGCTGGTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGA > 1:484786/1‑73 ACGCCCACCAGCTTGCTGTCGCTGCTGGTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGA < 2:484786/73‑1 TGGTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGATGACCATGAACGGTGACGTGATGGGCATGCGTGAGGTCAAGGCTATCGAATTGCCAGCCGGCAAGGCAGT < 1:222012/118‑1 TGGTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGATGACCATGAACGGTGACGTGATGGGCATGCGTGAGGTCAAGGCTATCGAATTGCCAGCCGGCAAGGCAGT > 2:222012/1‑118 CCATCACGTCACCGTTCATGGTCATCTCGTGCACCTGCACGGTCTTGGCCACGGGCGAAGCCACGCCCACCAGCTTGCTGTCGCTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2720547‑2720458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggTGGGCGTGGCTTCGCCCGTGGCCAAGACCGTGCAGGTGCACGAGATGACCATGAACGGTGACGTGATGGGCATGCGTGAGGTCAAGGCTATCGAATTGCCAGCCGGCAAGGCAGT > NC_002947/2720479‑2720593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |