New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2774330 =	58 (0.970)	4 (0.070)	4/228	NT	6.8%	coding (1225/1353 nt)	PP_5521	hypothetical protein
	?	NC_002947	2774391 =	54 (0.950)					coding (1164/1353 nt)	PP_5521	hypothetical protein

TAGCGCGCGATGGCGAGTACATTGTGGGTGATGCCTATGGCTACCTGCGGGCGTTTGGCGAAGAGGGTACGGAGCATTGGCAGCATTACCTGGGCTCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2774482‑2774330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagccCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCGCGCTACCCCCGCATACACCCTTGCGCCATCCTGCACCAGCGGGGTACGCGGGTCCTGGCT  >  NC_002947/2774391‑2774537                                                                                                                                                                                                                                                                                                              TAGCGCGCGATGGCGAGTACATTGTGGGTGATGCCTATGGCTACCTGCGGGCGTTTGGCGAAGAGGGTACGGAGCATTGGCAGCATTACCTGGGCTCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGA                                                                                                                                                        <  1:1037766/150‑1    CGCGCGATGGCGAGTACATTGTGGGTGATGCCTATGGCTACCTGCGGGCGTTTGGCGAAGAGGGTACGGAGCATTGGCAGCATTACCTGGGCTCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGAGCC                                                                                                                                                     >  2:416684/1‑150                                                                      CGGAGCATTGGCAGCATTACCTGGGCTCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGAGCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACC                                                                                   >  1:1143787/1‑150                                                                                           TGGGCGCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGAGCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCG                                                              >  2:1556381/1‑150                                                                                               CTCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGAGCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGACATCGCGCGCT                                                          <  2:1143787/150‑1                                                                                                                                      AACGCTGGTGGCGGCGAGCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCGCGCTACCCCCGCATACACCCTTGCGCCATCCTGCACCAGCGGG                   <  1:1556381/150‑1                                                                                                                                                     atctCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATAGCTCGCTACCCCCGCATACTTCCTTGCGCCATCCTGCACCAGCGGGGTACGCGGGTCCTGG    <  2:471073/146‑1                                                                                                                                                     GAGCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCGCGCTAC                                                        >  1:986568/1‑98                                                                                                                                                     GAGCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCGCGCTAC                                                        <  2:986568/98‑1                                                                                                                                                       GCCCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCGCGCTACCCCCGCATACACCCTTGCGCCATCCTGCACCAGCGGGGTACGCGGGTCCTGGCT  <  1:1514493/150‑1                                                                                                                                                                                                                                                                                                              TAGCGCGCGATGGCGAGTACATTGTGGGTGATGCCTATGGCTACCTGCGGGCGTTTGGCGAAGAGGGTACGGAGCATTGGCAGCATTACCTGGGCTCGACCATCAGTGCGATGGATATCAGCGCCGACGGGCAAACGCTGGTGGCGGCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2774482‑2774330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagccCAGGTAATGCTGCCAATGCTCCGTACCCTCTTCGCCAAACGCCCGCAGGTAGCCATAGGCATCACCCACAATGTACTCGCCATCGCGCGCTACCCCCGCATACACCCTTGCGCCATCCTGCACCAGCGGGGTACGCGGGTCCTGGCT  >  NC_002947/2774391‑2774537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.