New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2798676 =64 (1.070)5 (0.090) 5/224 NT 8.3% coding (105/693 nt) endX extracellular DNA endonuclease
?NC_002947 2798707 = 51 (0.910)coding (74/693 nt) endX extracellular DNA endonuclease

ATGGCGGTGTGCAGATTTTCTGGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGAGGCCAAGAAGGTCGCCTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2798830‑2798676
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaagGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCGCCATCGTCGCGATGGGCGAGGGTGAC  >  NC_002947/2798707‑2798852
                                                                                                                                                                                                                                                                                                             
ATGGCGGTGTGCAGATTTTCTGGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCACGCCGACGCCCCGCGCCCCTTCCACTAGGCCATGAAGGTCGCCT                                                                                                                                                         <  2:1334184/150‑1
                     GGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGCGACCTTCTTGGCCTCCTGGAAGGTGCGCGGGGCGTC                                                                                                                                      >  1:787841/1‑148
                     GGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGCGACCTTCTTGGCCTCCTGGAAGGTGCGCGGGGCGTC                                                                                                                                      <  2:787841/148‑1
                                                                                                                            CTTCCAGGAGGCCAAGAAGGTCGCCTGGAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAA                                                                >  1:78512/1‑115
                                                                                                                            CTTCCAGGAGGCCAAGAAGGTCGCCTGGAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAA                                                                <  2:78512/115‑1
                                                                                                                             TTCCAGGAGGCCAAGAAGGTCGCCTGGAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCG                            >  2:18534/1‑150
                                                                                                                                                       GAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCGCCATCGTCGCGATGGGCGAGGGTGAC  >  2:1363482/1‑150
                                                                                                                                                       GAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAA                                                                                 <  1:1621581/71‑1
                                                                                                                                                       GAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAA                                                                                 >  2:1621581/1‑71
                                                                                                                                                                                                                                                                                                             
ATGGCGGTGTGCAGATTTTCTGGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGAGGCCAAGAAGGTCGCCTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2798830‑2798676
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaagGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCGCCATCGTCGCGATGGGCGAGGGTGAC  >  NC_002947/2798707‑2798852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.