New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2798676 = | 64 (1.070) | 5 (0.090) | 5/224 | NT | 8.3% | coding (105/693 nt) | endX | extracellular DNA endonuclease |
? | NC_002947 | 2798707 = | 51 (0.910) | coding (74/693 nt) | endX | extracellular DNA endonuclease |
ATGGCGGTGTGCAGATTTTCTGGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGAGGCCAAGAAGGTCGCCTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2798830‑2798676 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaagGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCGCCATCGTCGCGATGGGCGAGGGTGAC > NC_002947/2798707‑2798852 ATGGCGGTGTGCAGATTTTCTGGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCACGCCGACGCCCCGCGCCCCTTCCACTAGGCCATGAAGGTCGCCT < 2:1334184/150‑1 GGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGCGACCTTCTTGGCCTCCTGGAAGGTGCGCGGGGCGTC > 1:787841/1‑148 GGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGCGACCTTCTTGGCCTCCTGGAAGGTGCGCGGGGCGTC < 2:787841/148‑1 CTTCCAGGAGGCCAAGAAGGTCGCCTGGAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAA > 1:78512/1‑115 CTTCCAGGAGGCCAAGAAGGTCGCCTGGAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAA < 2:78512/115‑1 TTCCAGGAGGCCAAGAAGGTCGCCTGGAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCG > 2:18534/1‑150 GAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCGCCATCGTCGCGATGGGCGAGGGTGAC > 2:1363482/1‑150 GAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAA < 1:1621581/71‑1 GAAGGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAA > 2:1621581/1‑71 ATGGCGGTGTGCAGATTTTCTGGACGATACCGAAGGAAGATTGACTGCGCATGAGAGTTTCGCTTTTCGCAGCAGCCTGCCTGTTACTGACCACTCCGCTTGCTCAAGCCGACGCCCCGCGCACCTTCCAGGAGGCCAAGAAGGTCGCCTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2798830‑2798676 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaagGTGCGCGGGGCGTCGGCTTGAGCAAGCGGAGTGGTCAGTAACAGGCAGGCTGCTGCGAAAAGCGAAACTCTCATGCGCAGTCAATCTTCCTTCGGTATCGTCCAGAAAATCTGCACACCGCCATCGTCGCGATGGGCGAGGGTGAC > NC_002947/2798707‑2798852 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |