| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2896630 | 50 (0.840) | 5 (0.100) | 5/204 | NT | 8.9% | intergenic (+43/‑95) | PP_2550/PP_2551 | transcriptional regulator/LysR family transcriptional regulator |
| ? | NC_002947 | = 2896673 | 60 (1.180) | intergenic (+86/‑52) | PP_2550/PP_2551 | transcriptional regulator/LysR family transcriptional regulator | |||||
CCCTAAAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2896464‑2896630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcaagcccgctcTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTCGTCGATCGCCTC < NC_002947/2896673‑2896531 CCCTAAAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGGCCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTT > 1:1031319/1‑150CCCTAAAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTT > 2:697158/1‑150 CCTAAAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGGAATCGTCTGGGCCGCGTTGCGGCCTGTTC > 1:812786/1‑150 CTAAAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCG > 1:621393/1‑150 AAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGG < 2:357285/150‑1 CCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAA > 2:1116287/1‑150 CCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGCCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAA < 2:1008816/150‑1 CGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGC < 1:1030376/150‑1 CGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGC < 2:780954/150‑1 GGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCC > 1:1574114/1‑150 TAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCG < 1:25001/150‑1 TAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCGCGAGGCGATCGACGAGCACGATGACGTGCAGAAGGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTGGCGTGCggggccg > 1:845822/1‑143 GCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGG < 1:336013/115‑1 GCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGG < 1:335236/115‑1 GCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGG > 2:335236/1‑115 GCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGG > 2:336013/1‑115 GAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGC > 1:211902/1‑106 GAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGC < 2:211902/106‑1 CTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGC < 2:364209/150‑1 GCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGG < 2:1259096/136‑1 GCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGG > 1:1259096/1‑136 GAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTT > 1:513107/1‑124 GAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTT < 2:513107/124‑1 TCGCTGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTCG > 2:577519/1‑150 TCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTC > 1:505286/1‑149 TCGCGGGCAAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTC < 2:505286/149‑1 AAGCCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTCGTCGATCGC > 2:9342/1‑150 CCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTCGTCGATCGCCTC > 2:621393/1‑150 CCCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTCGTCGATCGCCTC < 2:1106456/150‑1 CCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATT < 2:1472992/94‑1 CCGCTCTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATT > 1:1472992/1‑94 CCCTAAAAACCCGGTAAGCGCGGCCAGCCTGAGTGCTGAAGCGTTGGCCGAGGTCGAGGCGTTTCTCGAGGCGATCGACGAGCACGATGACGTGCAGAACGTCTATGTTGGCCTGACCGAGTAATCGTCGGGGCCGCGTTGCGGCCTGTTCGCGGGCAAGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2896464‑2896630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcaagcccgctcTCACAGGGTTCTCACACGGTTCAGCATCGTGAAAAACCTGCGGGAGCGGGCTTGCCCGCGAACAGGCCGCAACGCGGCCCCGACGATTACTCGGTCAGGCCAACATAGACGTTCTGCACGTCATCGTGCTCGTCGATCGCCTC < NC_002947/2896673‑2896531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |