| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2926918 = | 79 (1.320) | 6 (0.110) | 5/226 | NT | 7.3% | coding (142/2472 nt) | PP_2565 | UvrD/REP family helicase |
| ? | NC_002947 | 2926957 = | 79 (1.400) | coding (181/2472 nt) | PP_2565 | UvrD/REP family helicase | |||||
GAACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2927073‑2926918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtgCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCC > NC_002947/2926957‑2927100 GAACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GT > 1:357075/1‑150 AACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCTCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCGTGGCCAGTGCGCTGGCCT‑‑‑‑‑GTG < 2:1503527/150‑1 ACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGG > 1:1633749/1‑150 GTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTG > 1:1086692/1‑150 CTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGA > 2:305685/1‑150 CTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGA > 2:305947/1‑150 ACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCC > 1:1361915/1‑116 ACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCC < 2:1361915/116‑1 GCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTG > 1:939844/1‑150 CATGGCCAGTGCGCTGGCCTGTGGCGTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTC > 2:426733/1‑150 GGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCC < 1:1503527/150‑1 GAACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2927073‑2926918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtgCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCC > NC_002947/2926957‑2927100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |