| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2957115 = | 68 (1.140) | 11 (0.210) | 10/210 | NT | 16.0% | intergenic (+27/‑169) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| ? | NC_002947 | 2957202 = | 56 (1.070) | intergenic (+114/‑82) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
AAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957274‑2957115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCAC > NC_002947/2957202‑2957344 AAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCC > 2:2979/1‑150 AACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCG > 2:1240832/1‑150 GACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGGGACACGGGGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTC < 1:693731/150‑1 CGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCc > 2:1389031/1‑149 GCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGC < 2:64977/144‑1 GCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGC > 1:64977/1‑144 CCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑GGAAGCGCGGCGTGCATGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAG > 1:1095626/1‑150 ACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGAC > 1:1640527/1‑150 TGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCC > 2:1619939/1‑74 TGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCC < 1:1619939/74‑1 CGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑GGAAGCGCGGCGTGCATGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTT < 2:1095626/150‑1 ATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAG > 2:1547052/1‑150 CCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACA > 1:137488/1‑150 CCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACA > 2:968030/1‑150 AATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGT < 2:137488/150‑1 GACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTC < 2:1640527/150‑1 GGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTG < 1:1547052/150‑1 CCCGCTCCCACAGGGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCC > 1:104606/1‑150 CCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGG < 1:995008/115‑1 CCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGG > 2:995008/1‑115 CCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCAC < 1:143778/150‑1 CACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGC < 1:933585/146‑1 CACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGC > 2:933585/1‑146 AAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957274‑2957115‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCCCATGCAC > NC_002947/2957202‑2957344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |