| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3387814 | 60 (1.000) | 4 (0.070) | 4/224 | NT | 6.6% | coding (552/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | = 3387840 | 57 (1.020) | coding (578/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
TGGTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387658‑3387814‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG < NC_002947/3387840‑3387699 TGGTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTTTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCT > 2:536752/1‑150TGGTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCT > 2:732942/1‑150 CGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGG > 2:941909/1‑150 ATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGGAAGCGGTGCTGCCGGCA > 2:696932/1‑150 ATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA < 1:357728/150‑1 TCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCA > 1:599672/1‑83 TCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCA < 2:599672/83‑1 GTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGC > 1:1210118/1‑59 GTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGC < 2:1210118/59‑1 TGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG < 1:763610/150‑1 TGCCGGCACGCGCCAAGTTCTAGGTGCGGATCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGCGATGAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG < 1:691400/150‑1 CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGT > 1:711790/1‑54 CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGT < 2:711790/54‑1 TGGTGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387658‑3387814‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG < NC_002947/3387840‑3387699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |