New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3431097 | 60 (1.000) | 4 (0.070) | 4/230 | NT | 6.5% | coding (106/348 nt) | PP_3046 | hypothetical protein |
? | NC_002947 | = 3431135 | 58 (1.010) | coding (144/348 nt) | PP_3046 | hypothetical protein |
GCCCGTCGGCAGGCCACACAATTCCGTCCCGGCCAAGGAGCCTGAACATGAGCAAAACCTATGTAGAGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3430945‑3431097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGCCAGTTCGATCACTTCGCGGGAGATCTTGCCTGCGCCTTCGGACAGCAGGAATTCACCGGCATGGACCGGCTCTACATAGGTTTTGCTCATGTTCA < NC_002947/3431135‑3430987 GCCCGTCGGCAGGCCACACAATTCCGTCCCGGCCAAGGAGCCTGAACATGAGCAAAACCTATGTAGAGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGATG > 2:534816/1‑150 CCACACAATTCCGTCCCGGCCAAGGAGCCTGAACATGAGCAAAACCTATGTAGAGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGATGCCCGCTGGCAGTC > 1:1226298/1‑150 AACCTATGTAGAGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGATGCCCGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCGTCGCCTGGG < 2:1226298/150‑1 AGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGAT < 1:214685/83‑1 AGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGAT > 2:214685/1‑83 AAGATCTCCCGCGAAGTGATCGAACTGGCTCCAGGCGATGCCCGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGC > 2:1438559/1‑97 AAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGATGCCCGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGC < 1:1438559/97‑1 GCCCGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGCCAGTTCGATCACTTCGCGGGAGATCTTGCCTGCGCCTTCGGACAGCAGGAATTCACCGGCATGGACCGGCTCTACATAGGTT < 1:937559/140‑1 GCCCGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGCCAGTTCGATCACTTCGCGGGAGATCTTGCCTGCGCCTTCGGACAGCAGGAATTCACCGGCATGGACCGGCTCTACATAGGTT > 2:937559/1‑140 CCGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGCCAGTTCGATCACTTCGCGGGAGATCTTGCCTGCGCCTTCGGACAGCAGGAATTCACCGGCATGGACCGGCTCTACATAGGTTTTGCTCATGTTC > 1:1232656/1‑150 CGCCGGCAGTTAGCTGACCGAGCACCTGACCAGCCACCAGGGAATCGCCTGGGGCCAGTTCGATCACTTCGCGGGAGATCTTGCCTGCGCCTTCGGACAGCNGGAATTCACCGGCATGGACCGGCTCTACATAGGTTTTGCTCATGTTCA < 1:1096627/150‑1 GCCCGTCGGCAGGCCACACAATTCCGTCCCGGCCAAGGAGCCTGAACATGAGCAAAACCTATGTAGAGCCGGTCCATGCCGGTGAATTCCTGCTGTCCGAAGGCGCAGGCAAGATCTCCCGCGAAGTGATCGAACTGGCCCCAGGCGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3430945‑3431097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccGCTGGCAGTCAGCTGACCGAGCACCTGACCAGCCACCAGGGCATCGCCTGGGGCCAGTTCGATCACTTCGCGGGAGATCTTGCCTGCGCCTTCGGACAGCAGGAATTCACCGGCATGGACCGGCTCTACATAGGTTTTGCTCATGTTCA < NC_002947/3431135‑3430987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |