| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3460160 | 53 (0.890) | 6 (0.110) | 6/224 | NT | 10.0% | coding (245/1446 nt) | PP_3075 | transcriptional regulator |
| ? | NC_002947 | = 3460174 | 58 (1.040) | coding (231/1446 nt) | PP_3075 | transcriptional regulator | |||||
GATCAGCGCGCCCTGGTCATCGTGGATGGGCAGGCGCATGACCACCAACGGCTCGTTCGGCGTGTCGAGCATGTCCAGCAGGATGGGCCGGCCATTGCTCACCACATCGCGCATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3460009‑3460160‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgaCGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGATGTGGTGAGCAATGGCCGGCCCATCCTGCTGGACATGCTCGACACGCCGAACGAGCCGTTGGTGGTCATGCGCCTGCCCATCCACGA < NC_002947/3460174‑3460028 GATCAGCGCGCCCTGGTCATCGTGGATTGGCAGGCGCATGACCACCAACGGCTCGTTCGGCGTGTCGAGCATGTCCAGCAGGATGGGCCGGCCATTGCTCACCACATCGCGCATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCC < 2:1080752/150‑1 TCGTGGATGGGCAGGCGCATGACCACCAACGGCTCGTTCGGCATGTCGAGCATGTCCAGCAGGATGTGCCGGCCATTGCTCGCCACATGCCGCATGATGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGACGCTGCCAGTGCCATCG > 2:619118/1‑150 TGGGCAGGCGCATGACCACCAACGGCTCGTTCGGCGTGTCGAGCATGTCCAGCAGGATGGGCCGGCCATTGCTCACCACATCGCGCATCAGGCTGCCGGGGANCACTGTTTCNCACGGCTGNCCGACGCTGCCAGTGCCATCGGCCAGCC < 1:619118/150‑1 GCGCATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGACGCTGCCAGTGCCATCGGC > 1:1369492/1‑63 GCGCATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGACGCTGCCAGTGCCATCGGC < 2:1369492/63‑1 ATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAA > 1:189735/1‑72 ATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAA < 2:189735/72‑1 TGGCCGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAA < 1:555129/39‑1 TGGCCGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAA > 2:555129/1‑39 GCCGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGATGTGGTGAGCAATGGCCGGCCCATCCTGCTGGACATGCTCGACACGCCGAACGAGCCGTTGGTGGTCATGCGCCTGCCCATCCAC < 2:1106453/150‑1 GCCGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGAAGTGGTGAGCAGTGGCCGGCCCATCCTGCTGGACATGCTCGACACGCCGAACGCGCCGTTGGGGGTCATGCGCGTGCGCATCCAC > 1:419222/1‑150 CGACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGATGTGGTGAGCAATGGCCGGCCCATCCTGCTGGACATGCTCGACACGCCGAACGAGCCGTTGGTGGTCATGCGCCTGCCCATCCACGA < 1:973315/150‑1 ACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGATGTGGTGAGCAATGGCCGGCCCATCCTGCT > 1:1034058/1‑91 ACGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGATGTGGTGAGCAATGGCCGGCCCATCCTGCT < 2:1034058/91‑1 GATCAGCGCGCCCTGGTCATCGTGGATGGGCAGGCGCATGACCACCAACGGCTCGTTCGGCGTGTCGAGCATGTCCAGCAGGATGGGCCGGCCATTGCTCACCACATCGCGCATCAGGCTGCCGGGGATCACTGTTTCGCACGGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3460009‑3460160‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgaCGCTGCCAGTGCCATCGGCCAGCCGTGCGAAACAGTGATCCCCGGCAGCCTGATGCGCGATGTGGTGAGCAATGGCCGGCCCATCCTGCTGGACATGCTCGACACGCCGAACGAGCCGTTGGTGGTCATGCGCCTGCCCATCCACGA < NC_002947/3460174‑3460028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |