| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3563454 = | 70 (1.170) | 4 (0.070) | 4/224 | NT | 5.8% | coding (413/1296 nt) | PP_3146 | oxidoreductase |
| ? | NC_002947 | 3563485 = | 64 (1.150) | coding (382/1296 nt) | PP_3146 | oxidoreductase | |||||
CTTTGCCCGGCATGTCGGCCAGGACGGTGTGCGCTACCTGAAGCAGGCCGGCATCGACTCAGTGGAACTGGTGGCCGAGCGCATCGCCCGCTACGGCATTGCCTGCGATCTGCGCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3563609‑3563454‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagttcgcAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGCCGGGCAAAGCCGCTGACATCATGGCCAATACC > NC_002947/3563485‑3563632 CTTTGCCCGGCATGTCGGCCAGGACGGTGTGCGCTACCTGAAGCAGGCCGGCATCGACTCAGTGGAACTGGTGGCCGAGCGCATCGCCCGCTACGGCATTGCCTGCGATCTGCGCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCA < 1:1221445/150‑1CTTTGCCCGGCATGTCGGCCAGGACGGTGTGCGCTACCTGAAGCAGGCCGGCATCGACTCAGTGGAACTGGTGGCCGAGCGCATCGCCCGCTACGGCATTGCCTGCGATCTGCGCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCA < 1:1417307/150‑1 TGTGCGCTACCTGAAGCAGGCCGGCATCGACTCAGTGGAACTGGTGGCCGAGCGCATCGCCCGCTACGGCATTGCCTGCGATCTGCGCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGCA < 1:299090/130‑1 TGTGCGCTACCTGAAGCAGGCCGGCATCGACTCAGTGGAACTGGTGGCCGAGCGCATCGCCCGCTACGGCATTGCCTGCGATCTGCGCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGCA > 2:299090/1‑130 GCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGTGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCT > 1:559149/1‑148 GCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGTGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCT < 2:559149/148‑1 TTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGG > 1:404941/1‑74 TTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGG < 2:404941/74‑1 CAGTTCGCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGCCGGGCAAAGCCGCT > 1:980194/1‑138 CAGTTCGCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGCCGGGCAAAGCCGCT < 2:980194/138‑1 GCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGCCGG > 1:432934/1‑121 GCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGCCGG < 2:432934/121‑1 GCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCAACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGGAGCGCACAACGTCCTGGCCTACATGCCGGGCAAAGACGCTGACATCATGGCCGATACC > 2:90042/1‑150 GCAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGAGATGAGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGGCGGGCAAAGCCGCTGACATCATGGCCAATACC > 1:569123/1‑150 CAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACC < 1:753916/101‑1 CAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACC > 2:753916/1‑101 CTTTGCCCGGCATGTCGGCCAGGACGGTGTGCGCTACCTGAAGCAGGCCGGCATCGACTCAGTGGAACTGGTGGCCGAGCGCATCGCCCGCTACGGCATTGCCTGCGATCTGCGCTGGGGCTTCTGCGAACTGGCCAACACCGCGGCGCAGTTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3563609‑3563454‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagttcgcAGAAGCCCCAGCGCAGATCGCAGGCAATGCCGTAGCGGGCGATGCGCTCGGCCACCAGTTCCACTGAGTCGATGCCGGCCTGCTTCAGGTAGCGCACACCGTCCTGGCCGACATGCCGGGCAAAGCCGCTGACATCATGGCCAATACC > NC_002947/3563485‑3563632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |