| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3613484 = | 70 (1.170) | 4 (0.070) | 4/236 | NT | 5.2% | coding (243/3396 nt) | mcoA | Mn(II) copper oxidase A |
| ? | NC_002947 | 3613530 = | 76 (1.290) | coding (197/3396 nt) | mcoA | Mn(II) copper oxidase A | |||||
CGACCAGCCGGACGACCCGACGTCTGCCTTGCTTGAGCTGAACACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3613574‑3613484‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGACAGAGGT > NC_002947/3613530‑3613678 CGACCAGCCGGACGACCCGACGTCTGCCTTGCTTGAGCTGAACACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGT > 1:9103/1‑90CGACCAGCCGGACGACCCGACGTCTGCCTTGCTTGAGCTGAACACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGT < 2:9103/90‑1 CCGACGTCTGCCTTGCTTGAGCTGAACACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGTGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGC > 1:195028/1‑150 AACACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCATGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAG > 1:974990/1‑150 ACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGTGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGG > 1:1053411/1‑107 ACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGTGGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGG < 2:1053411/107‑1 GGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGACAGAGGT < 1:1549215/150‑1 CGACCAGCCGGACGACCCGACGTCTGCCTTGCTTGAGCTGAACACCATGCCAGAGGCCAACGAAGGCTCGCTGGAGTTGACCGATGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3613574‑3613484‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGTGTTCAGCTCAAGCAAGGCAGACGTCGGGTCGTCCGGCTGGTCGGTGTAGGCCGACGGGTCGGTTGGCGGGGGCATGCTGTTGTCGTCGAGGGGAGAGGCCATGGCCGTGATCAACCCGAGGCTGATCATCAGTGCAGTGACAGAGGT > NC_002947/3613530‑3613678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |