New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3743810	65 (1.090)	5 (0.090)	5/228	NT	7.1%	coding (51/1002 nt)	paoB	aromatic aldehyde dehydrogenase FAD‑binding subunit
	?	NC_002947	= 3743823	69 (1.210)					coding (64/1002 nt)	paoB	aromatic aldehyde dehydrogenase FAD‑binding subunit

GGCAACCTTTGCAGGTGTGGTGCATATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3743656‑3743810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgag‑cTGGCGTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC  <  NC_002947/3743823‑3743675                                                                                                                                                                                                                                                                                                                    GGCAACCTTTGCAGGTGTGGTGCATATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCG                                                                                                                                                              >  2:6786/1‑150                                                                                 CCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAGCCTGGCGTCA‑GCCAGG                                                                                                                                         <  1:989712/90‑1                                                                                 CCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAGCCTGGCGTCA‑GCCAGG                                                                                                                                         >  2:989712/1‑90                                                                                                 CCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑CTGGCGTCA‑GCCAGGCTCACG                                                                                                                                   <  1:485853/79‑1                                                                                                 CCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑CTGGCGTCA‑GCCAGGCTCACG                                                                                                                                   >  2:485853/1‑79                                                                                                                                          ATCAGCGAAGCCGTGAGCCTGGC‑TGACGCCA‑GCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGAC                   >  2:519360/1‑150                                                                                                                                                     accGAG‑CTGGCGTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGCCCGTCATCAACGGTAGGGCTGCTTCAACCGAAGTGACGATGTTGCTAT        >  1:1291243/4‑150                                                                                                                                                       TGAG‑CTGGCGTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGT                                                        >  1:1570586/1‑100                                                                                                                                                       TGAG‑CTGGCGTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGT                                                        <  2:1570586/100‑1                                                                                                                                                            CTGGCGTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC  <  1:522709/150‑1                                                                                                                                                                                                                                                                                                                    GGCAACCTTTGCAGGTGTGGTGCATATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3743656‑3743810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgag‑cTGGCGTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC  <  NC_002947/3743823‑3743675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.