New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4308166 = | 58 (0.970) | 4 (0.070) | 4/230 | NT | 6.9% | coding (126/156 nt) | PP_3780 | hypothetical protein |
? | NC_002947 | 4308188 = | 52 (0.910) | coding (104/156 nt) | PP_3780 | hypothetical protein |
AATGATTATCCTGCAGCCTGACGCTCAGTGCTGATATACGAGCAGGTGTTCCTCGGCCTGTTGTTCGTGGCGTGGGCCAGGATTGCTGGCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4308318‑4308166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTCAGGCTGCAGGATAATCATTCTATTGAGGTTTTCTTGC > NC_002947/4308188‑4308336 AATGATTATCCTGCAGCCTGACGCTCAGTGCTGATATACGAGCAGGTGTTCCTCGGCCTGTTGTTCGTGGCGTGGGCCAGGATTGCTGGCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACG > 1:385794/1‑150 GCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACG > 1:26181/1‑62 GCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACG < 2:26181/62‑1 CCGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGT > 2:611549/1‑150 CGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTC < 1:611549/150‑1 CACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGA > 1:268725/1‑106 CACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGA < 2:268725/106‑1 GTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATAT < 1:770011/102‑1 GTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATAT > 2:770011/1‑102 CAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCGCGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTCAGGCTGCAGGATAATCATTCTATTGAGGTTTTCTTGC < 2:972180/150‑1 AATGATTATCCTGCAGCCTGACGCTCAGTGCTGATATACGAGCAGGTGTTCCTCGGCCTGTTGTTCGTGGCGTGGGCCAGGATTGCTGGCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4308318‑4308166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTCAGGCTGCAGGATAATCATTCTATTGAGGTTTTCTTGC > NC_002947/4308188‑4308336 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |