New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4353694 =	47 (0.790)	3 (0.050)	3/238	NT	6.0%	coding (776/1086 nt)	yrpB	2‑nitropropane dioxygenase
	?	NC_002947	4353720 =	48 (0.810)					coding (802/1086 nt)	yrpB	2‑nitropropane dioxygenase

AGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGC‑C‑TGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4353822‑4353694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAGCGACACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGA  >  NC_002947/4353720‑4353868                                                                                                                                                                                                                                                                                          AGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGCCAG‑‑GCGCTGGACAGCGCGCATGCCAGCGACACCGCCCTGACCAAC                                                                                                                                  <  1:323525/150‑1                                                                                                      CTGGCAGGCGCGCTGTCCAGCGC‑C‑TGGCAGCGACACCGCCCTGACCAACCTGTT                                                                                                                             <  1:439606/54‑1                                                                                                      CTGGCAGGCGCGCTGTCCAGCGC‑C‑TGGCAGCGACACCGCCCTGACCAACCTGTT                                                                                                                             >  2:439606/1‑54                                                                                                                                   CAGCGACACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGA  >  2:443864/1‑150                                                                                                                                                                                                                                                                                          AGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGC‑C‑TGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4353822‑4353694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAGCGACACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGA  >  NC_002947/4353720‑4353868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.