New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4708671 =	58 (0.970)	4 (0.070)	4/224	NT	6.3%	coding (498/864 nt)	PP_4165	hypothetical protein
	?	NC_002947	4708724 =	64 (1.150)					coding (445/864 nt)	PP_4165	hypothetical protein

CTACCGGGGGCTGGTGATGCTCGACTCTCCGGTGCTCACCCGCGCTGATCAATGGCTGCTGCGCACAGCCAAGCGCTTTGGTTTCATCGACCGTATCACACCGGCCGGGCGCACCCTGGGGCGTCGCGAAACGTTCAATGACCGCGACAGCGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4708827‑4708671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccggCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGGGGCAGCGCAATGCCGCGTGCAGGTGCAACACGCCA  >  NC_002947/4708724‑4708869                                                                                                                                                                                                                                                                                                                 CTACCGGGGGCTGGTGATGCTCGACTCTCCGGTGCTCACCCGCGCTGATCAATGGCTGCTGCGCACAGCCAAGCGCTTTGGTTTCATCGACCGTATCACACCGGCCGGGCGCACCCTGGGGCGTCGCGAAACGTTCAATGACCGCGACAG                                                                                                                                                           >  2:872520/1‑150                                                                                                    ACCGGCCGGGCGCACCCTGGGGCGTCGCGAAACGTTCAATGACCGCGACAGCGCCCGGCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTG                                                                                             >  1:399444/1‑113                                                                                                    ACCGGCCGGGCGCACCCTGGGGCGTCGCGAAACGTTCAATGACCGCGACAGCGCCCGGCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTG                                                                                             <  2:399444/113‑1                                                                                                      CGGCCGGGCGCACCCTGGGGCGTCGCGAAACGTTCAATGACCGCGACAGCGCCCGGCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAG                                                      >  2:806343/1‑150                                                                                                                         GCGTCGCGAAACGTTCAATGACCGCGACAGCGCCCGGCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGGGG                                   <  1:806343/150‑1                                                                                                                                                        GCCCGGCCGGTGTGATACGGTCGATGAAACCAAAACGCTTGGCTGTGCGCAGCAGACATTGATCAGTGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGGGGCAGCGCAATGCCGCGTGCAGGTGCAACACGC    >  1:203969/1‑150                                                                                                                                                          CCGGCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGGGGCAGCGCAATGCCGCGTGCAGGTGCAACACGCCA  <  1:174950/150‑1                                                                                                                                                             GCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGG                                     <  1:1619821/112‑1                                                                                                                                                             GCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGG                                     >  2:1619821/1‑112                                                                                                                                                                                                                                                                                                                 CTACCGGGGGCTGGTGATGCTCGACTCTCCGGTGCTCACCCGCGCTGATCAATGGCTGCTGCGCACAGCCAAGCGCTTTGGTTTCATCGACCGTATCACACCGGCCGGGCGCACCCTGGGGCGTCGCGAAACGTTCAATGACCGCGACAGCGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4708827‑4708671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccggCCGGTGTGATACGGTCGATGAAACCAAAGCGCTTGGCTGTGCGCAGCAGCCATTGATCAGCGCGGGTGAGCACCGGAGAGTCGAGCATCACCAGCCCCCGGTAGTACTCGGGGCAGCGCAATGCCGCGTGCAGGTGCAACACGCCA  >  NC_002947/4708724‑4708869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.