| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4726012 = | 48 (0.800) | 6 (0.100) | 6/238 | NT | 10.8% | intergenic (‑134/+102) | PP_4183/brnQ | membrane protein/branched‑chain amino acid transporter |
| ? | NC_002947 | 4726044 = | 51 (0.860) | intergenic (‑166/+70) | PP_4183/brnQ | membrane protein/branched‑chain amino acid transporter | |||||
ACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4726151‑4726012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCACCCACCAGG > NC_002947/4726044‑4726174 ACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTT < 2:1571575/140‑1ACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGCGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTT > 1:1571575/1‑140 TCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTT < 1:1572348/131‑1 TCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTT > 2:1572348/1‑131 CAAGCCGCGCGAGGCGCTGGCCTGACCGGACGAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAAAGCCCCGCATCCTTTCGGAGACGGGGCTCTCTTGTTTTCACCCTTGGCGGGCA < 1:235091/150‑1 GGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTCGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCG < 2:235091/150‑1 GAGCCCCGTCTCCGAAAGGATGCGGGGCTTTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTC > 1:1628142/1‑90 GAGCCCCGTCTCCGAAAGGATGCGGGGCTTTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTC < 2:1628142/90‑1 CCCCGTCTCCGAAAGGATGCGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCA > 1:1292481/1‑150 CGAAAGGATGCGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCACCCACCAGG < 2:1292481/150‑1 TCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGC < 1:1132196/83‑1 TCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGC > 2:1132196/1‑83 ACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4726151‑4726012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCACCCACCAGG > NC_002947/4726044‑4726174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |