New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4733889 =72 (1.200)4 (0.070) 4/234 NT 5.5% coding (1792/2832 nt) sucA 2‑oxoglutarate dehydrogenase subunit E1
?NC_002947 4733906 = 67 (1.150)coding (1775/2832 nt) sucA 2‑oxoglutarate dehydrogenase subunit E1

GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAGGCCGGTGGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4733991‑4733889
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC  >  NC_002947/4733906‑4733957
                                                                                                                                                           
GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAAGCCACCGGCCTGCATCTTCTGACGGTCTTCGTA                                  <  1:332731/123‑1
GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAAGCCACCGGCCTGCATCTTCTGACGGTCTTCGTA                                  >  2:332731/1‑123
                                                                                   GATGCAGGCCGGTGGCTTGCATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC  >  1:349978/1‑72
                                                                                   GATGCAGGCCGGTGGCTTGCATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC  <  2:349978/72‑1
                                                                                                                                                           
GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAGGCCGGTGGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4733991‑4733889
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC  >  NC_002947/4733906‑4733957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.