New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4733889 = | 72 (1.200) | 4 (0.070) | 4/234 | NT | 5.5% | coding (1792/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
? | NC_002947 | 4733906 = | 67 (1.150) | coding (1775/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAGGCCGGTGGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4733991‑4733889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC > NC_002947/4733906‑4733957 GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAAGCCACCGGCCTGCATCTTCTGACGGTCTTCGTA < 1:332731/123‑1 GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAAGCCACCGGCCTGCATCTTCTGACGGTCTTCGTA > 2:332731/1‑123 GATGCAGGCCGGTGGCTTGCATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC > 1:349978/1‑72 GATGCAGGCCGGTGGCTTGCATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC < 2:349978/72‑1 GATCTGTCGGCCAAGCTGCTCGAGCTGCCGGAAGGTTTCGTGGTCCAGCGTCAGGTGTCGAAGATCTACGAAGACCGTCAGAAGATGCAGGCCGGTGGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4733991‑4733889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcATCTTCTGACGGTCTTCGTAGATCTTCGACACCTGACGCTGGACCACGAAAC > NC_002947/4733906‑4733957 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |