| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5115683 = | 53 (0.890) | 5 (0.090) | 5/226 | NT | 9.4% | coding (151/861 nt) | PP_4500 | TrpH family protein |
| ? | NC_002947 | 5115709 = | 47 (0.830) | coding (125/861 nt) | PP_4500 | TrpH family protein | |||||
CTCTATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115837‑5115683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcctTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCG > NC_002947/5115709‑5115857 CTCTATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCA > 2:1470674/1‑150CTCTATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCA > 2:188253/1‑150 CTATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAGG < 2:419758/150‑1 TATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAG > 1:1573268/1‑148 TATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAG < 2:1573268/148‑1 TGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAGGCCTTCGAGGGTGTCATGGTC < 1:188253/150‑1 CACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCGGGCACTGACCGACCATGACACCCTCGAAGGCCTGGCGCGCTTCG‑GGCAGGCCTTCGAGGGTGTCATGGTCGGT < 1:1016753/150‑1 CCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCAC < 1:1164017/79‑1 CCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCAC > 2:1164017/1‑79 CTCGAAGGCCT‑GCCCGAAGCGCGCCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAAC > 2:948634/1‑150 GCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGAT > 1:1078986/1‑150 GCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGAT > 2:412175/1‑150 CTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTC > 1:1313038/1‑150 TTCGAGGGTGTCATGGTCGGTCACTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCG > 2:1253660/1‑150 CTCTATGAATGTTGATCTGCACTGTCACAGCACGGCCTCCGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCT‑GCCCGAAGCGCGCCAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115837‑5115683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcctTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCG > NC_002947/5115709‑5115857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |