| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5299053 | 65 (1.090) | 4 (0.070) | 4/230 | NT | 5.7% | coding (1097/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| ? | NC_002947 | = 5299072 | 71 (1.240) | coding (1078/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease | |||||
CGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5298903‑5299053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcGCGGTGCTGGGTGACCTGTGCCGGGATGCTGAGGAGGGCTTTTACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCA < NC_002947/5299072‑5298927 CGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGG < 1:1509575/150‑1 ATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGG > 1:639017/1‑135 ATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGG < 2:639017/135‑1 CGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGGCGCGGTGCTGGGTGACCTGTGCCGGGATGCT > 1:419533/1‑108 CGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGGCGCGGTGCTGGGTGACCTGTGCCGGGATGCT < 2:419533/108‑1 CAGCGACTCGCCACTGACCTGCTTAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGGCGCGGTGCTGGGTGACCTGTGCCGGG > 1:1287127/1‑99 CAGCGACTCGCCACTGACCTGCTTAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGGCGCGGTGCTGGGTGACCTGTGCCGGG < 2:1287127/99‑1 CCGGCGCGGTGCTGGGTGACCTGTGCCGGGATGCTGAGGAGGGCTTTTACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGTCGGCGATGAGCAGCGTCACCCGCTGGCCCAGC < 1:130972/150‑1 CGGCGCGGTGCTGGGTGACCTGTGCCGGGATGCTGAGGAGGGCTTTTACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCA < 1:560089/150‑1 CGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCACTGACCTGCTGAAGCCACGCTGCAGTCGCCGGCGAGTAAAAGCCCTCCTCAGCATCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5298903‑5299053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcGCGGTGCTGGGTGACCTGTGCCGGGATGCTGAGGAGGGCTTTTACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCA < NC_002947/5299072‑5298927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |