New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5383673 =	61 (1.020)	4 (0.070)	4/226	NT	7.3%	coding (89/1671 nt)	lldP	L‑lactate permease
	?	NC_002947	5383704 =	44 (0.780)					coding (120/1671 nt)	lldP	L‑lactate permease

GCAATTGGCCAGAGGCCATAGAGGAAGCCGTAACCCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5383826‑5383673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggccaCGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTTC  >  NC_002947/5383704‑5383851                                                                                                                                                                                                                                                                                                                GCAATTGGCCAGAGGCCATAGAGGAAGCCGTAACCCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGG                                                                                                                                                          >  1:534622/1‑150                                   CCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGC                                                                                                                                                        <  1:990608/118‑1                                   CCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGC                                                                                                                                                        >  2:990608/1‑118                                                                                                                 TGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTC                                                  <  1:1047141/142‑1                                                                                                                 TGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTC                                                  >  2:1047141/1‑142                                                                                                                      GCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGtgg                                                             >  2:1358866/1‑123                                                                                                                      GCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGTGG                                                             <  1:1358866/126‑1                                                                                                                                                    AGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGG       <  2:476533/150‑1                                                                                                                                                     GGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGT      <  1:578504/150‑1                                                                                                                                                     GGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGACCTCTGGCCAATTACCTGGATCATCGTTGCCGCGGT      >  1:356397/1‑150                                                                                                                                                      GGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGCAAAGGCTGGCTCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTG     >  1:608938/1‑150                                                                                                                                                        CCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTT   >  2:1391754/1‑150                                                                                                                                                         CACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGCCTTCGGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTTC  >  1:500503/1‑150                                                                                                                                                                                                                                                                                                                GCAATTGGCCAGAGGCCATAGAGGAAGCCGTAACCCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5383826‑5383673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggccaCGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTTC  >  NC_002947/5383704‑5383851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.