| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5542782 = | 49 (0.820) | 3 (0.050) | 3/240 | NT | 5.9% | intergenic (‑36/+78) | dnaB/rplI | replicative DNA helicase/50S ribosomal protein L9 |
| ? | NC_002947 | 5542816 = | 47 (0.790) | intergenic (‑70/+44) | dnaB/rplI | replicative DNA helicase/50S ribosomal protein L9 | |||||
TTAACATCGGGCACGGTCCTGTTTTCGACAGGCCGTGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5542822‑5542782‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTACGT > NC_002947/5542816‑5542924 TTAACATCGGGCACGGTCCTGTTTTCGACAGGCCGTGCCCTATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTACGT > 1:1551955/1‑150 GCACGGTCCTGTTTTCGACAGGCCGTGCCCTATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGAC > 1:395780/1‑90 GCACGGTCCTGTTTTCGACAGGCCGTGCCCTATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGAC < 2:395780/90‑1 TTAACATCGGGCACGGTCCTGTTTTCGACAGGCCGTGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5542822‑5542782‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTACGT > NC_002947/5542816‑5542924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |