| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5893175 = | 75 (1.250) | 4 (0.070) | 4/228 | NT | 5.8% | coding (151/582 nt) | PP_5167 | hypothetical protein |
| ? | NC_002947 | 5893244 = | 59 (1.040) | coding (82/582 nt) | PP_5167 | hypothetical protein | |||||
CCCATGCGCAATGAGTCGATTCGCTACCTGATTGTGCCGGGTTGGCAAGGATCGCCAGACAACCATTGGCAGAGTCACTGGCAGCGCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5893328‑5893175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgcGCTGCCAGTGACTCTGCCAATGGTTGTCTGGCGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGCGCATGGGGACGCCTCCAGTAAGTTTGCGTGCTTGGAGACAAGTATAGGGAGGGCGAAATATTCGTAA > NC_002947/5893244‑5893388 CCCATGCGCAATGAGTCGATTCGCTACCTGATTGTGCCGGGTTGGCAAGGATCGCCAGACAACCATTGGCAGAGTCACTGGCAGCGCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGG < 1:479127/150‑1CCCATGCGCAATGAGTCGATTCGCTACCTGATTGTGCCGGGTTGGCAAGGATCGCCAGACAACCATTGGCAGAGTCACTGGCAGCGCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGG > 2:479127/1‑150 CCATGCGCAATGAGTCGATTCGCTACCTGATTGTGCCGGGTTGGCAAGGATCGCCAGACAACCATTGGCAGAGTCACTGGTTGGTCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGG > 1:516333/1‑150 GCAGCGCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGGTGCGCTGCCAGTGACTCTGCCAATGGTTGTCTGGCGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATT > 1:625890/1‑150 AGCGCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGGTGCGCTGCCAGTGACTCTGCCAATGGTTGTCTGGCGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGC < 2:625890/150‑1 TGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGGTGCGCTGCCAGTGACTCTGCCAATGGTTGTCTGGTGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGCGCATGGGGA > 1:634053/1‑150 CACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGGTGCGCTGCCAGTGACTCTGCCAATGGTTGTCTGGTGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGCGCATGGGGACGCCTCCAGTAA < 2:634053/150‑1 GGTGCGCTGCCAGTGACTCTGCCAATGGTTGTCTGGCGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGCGCATGGGGACGCCTCCAGTAAGTTTGCGTGCTTGGAGACAAGTATAGGGAGGGCGAAATATTCGTAA < 2:749116/150‑1 GGTGCGCTGCCAGTGACTCTGCCAATGGTTGTCTGGCGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGCGCATGGGGACGCCTCCAGTAAGTTTGCGTGCTTGGAGACAAGTATAGGGAGGGCGAAATATTCGTAA < 2:849723/150‑1 CCCATGCGCAATGAGTCGATTCGCTACCTGATTGTGCCGGGTTGGCAAGGATCGCCAGACAACCATTGGCAGAGTCACTGGCAGCGCACCCTGCCCAACAGTGCACGGGTTGAACAGCAAGACTGGCTCACCCCGCAGCGGCAGGACTGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5893328‑5893175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgcGCTGCCAGTGACTCTGCCAATGGTTGTCTGGCGATCCTTGCCAACCCGGCACAATCAGGTAGCGAATCGACTCATTGCGCATGGGGACGCCTCCAGTAAGTTTGCGTGCTTGGAGACAAGTATAGGGAGGGCGAAATATTCGTAA > NC_002947/5893244‑5893388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |