| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5924607 | 54 (0.900) | 4 (0.080) | 4/190 | NT | 7.5% | intergenic (‑121/+76) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| ? | NC_002947 | = 5924643 | 56 (1.180) | intergenic (‑157/+40) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H | |||||
AACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5924440‑5924607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcggctaaagccgctcctacaCAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAGAGA < NC_002947/5924643‑5924495 AACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCG < 1:660139/150‑1 ACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG > 2:962907/1‑150 ACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG < 2:143997/150‑1 TGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAG < 2:335543/150‑1 CTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGC > 1:812131/1‑150 TCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG < 2:811513/139‑1 TCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG > 1:811513/1‑139 TTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGCTTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCC > 2:518271/1‑150 TTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCC > 1:233965/1‑150 GACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGC < 2:1579973/102‑1 GACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGC > 1:1579973/1‑102 GGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGG < 1:1219760/145‑1 GGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGG > 2:1219760/1‑145 CTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCG > 2:161140/1‑141 CTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCG < 1:161140/141‑1 TTCGCGGCTAAAGCCGCTCCTACACGGGTAAAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCC > 1:1276670/1‑150 TTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCC > 1:962907/1‑150 TTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAA > 1:1197303/1‑104 TTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAA < 2:1197303/104‑1 TTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGA > 1:1051616/1‑86 TTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGA < 2:1051616/86‑1 CGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCAT < 1:293927/150‑1 CGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCAT < 2:1185224/150‑1 GCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATt > 1:343912/1‑149 CGGCTAAAGCCGCTCCTACCCAGGTACAGCAATGAATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGA < 2:343912/150‑1 CGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGA < 1:757523/150‑1 GGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGC < 2:1311603/93‑1 GGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGC > 1:1311603/1‑93 AAGCCGCTCCTCCACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTG < 1:335688/150‑1 CCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGCCTTGTAAGTTTCCATGAGGCCTGGTC > 1:125653/1‑150 GCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTG < 2:1180767/47‑1 GCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTG > 1:1180767/1‑47 CTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAG < 1:405254/150‑1 TCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCAACTGTCCAGGCGGCGGTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGG < 2:1276670/150‑1 CCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTA > 2:102258/1‑147 CCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTA < 1:102258/147‑1 CCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATAGGCAATCCCTTACTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGA > 2:740440/1‑150 CTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAA < 1:1137703/150‑1 TACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAG > 2:1572912/1‑150 ACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAGAGA < 2:125653/150‑1 ACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGACTGGTCTAGGAAGAGA < 2:1399825/150‑1 ACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGAC > 2:1500235/1‑115 ACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGAC < 1:1500235/115‑1 AACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5924440‑5924607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcggctaaagccgctcctacaCAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAGAGA < NC_002947/5924643‑5924495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |