| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5927646 | 65 (1.090) | 4 (0.070) | 4/230 | NT | 5.6% | coding (305/1623 nt) | PP_5195 | iron ABC transporter permease |
| ? | NC_002947 | = 5927661 | 73 (1.270) | coding (290/1623 nt) | PP_5195 | iron ABC transporter permease | |||||
AACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5927493‑5927646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaTCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAATGCGCCTGCCTCGGGTGCGTTCCACCGGTGGGGTAATCACCGTCCTGGTGCTGGTCTTC < NC_002947/5927661‑5927513 AACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCGCACCGGTGGAACGCACCCGTCGCGTGCGCATTGGTCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAAC > 1:115466/1‑150AACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAAC < 1:137162/150‑1AACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAAC < 1:890849/150‑1 AAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCC > 2:769743/1‑150 GGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGC > 1:1145115/1‑138 GGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGC < 2:1145115/138‑1 GATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAAC < 1:368417/134‑1 GATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAAC > 2:368417/1‑134 ACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCATCCCGGCCTACGTGCTGGCGTTC < 1:1326891/114‑1 ACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCATCCCGGCCTACGTGCTGGCGTTC > 2:1326891/1‑114 GGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCATCCCGGCCTACGTGCTGGC < 1:320042/92‑1 GGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCATCCCGGCCTACGTGCTGGC > 2:320042/1‑92 GCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAATGCGCCTGCCTCGGGTGCGTTCCACCGGTGGGGTAATCACCGTCCTGGTGCTGGTC < 1:1420854/150‑1 ATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAATGCGCCTGCCTCGGGTGCGTTCCACCGGTGGGGTAATCACCGTCCTGGTGCTGGTCTTC > 1:1222660/1‑150 AACAAGTAGACATAGGGATAGAAGACCAGCACCAGGACGGTGATTACCCCACCGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5927493‑5927646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaTCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAATGCGCCTGCCTCGGGTGCGTTCCACCGGTGGGGTAATCACCGTCCTGGTGCTGGTCTTC < NC_002947/5927661‑5927513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |