New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5976471 | 52 (0.870) | 9 (0.160) | 7/230 | NT | 14.7% | coding (216/1491 nt) | yifB | ATP‑dependent chelatase |
? | NC_002947 | = 5976486 | 55 (0.960) | coding (231/1491 nt) | yifB | ATP‑dependent chelatase |
ACCCACCTGGCCAACGGCCTGCCTCATCTCACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5976322‑5976471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGGC < NC_002947/5976486‑5976338 ACCCACCTGGCCAACGGCCTGCCTCATCTCACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCC > 2:1068923/1‑150 AACGGCCTGCCTCATCTCACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAG > 2:1065573/1‑150 CATCTCACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGC < 1:1610283/150‑1 TGGTCGGCCTGCCGGAAACCACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGG < 1:1065573/150‑1 CACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGG < 1:148173/131‑1 CACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGG > 2:148173/1‑131 GCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGA > 2:820484/1‑94 GCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGA < 1:820484/94‑1 CATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGA > 2:619755/1‑87 CATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCCATCCTTGGGCAGGTCGGCGGGGGCGA < 1:619755/87‑1 CGCCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGT < 2:899485/139‑1 CGCCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGT > 1:899485/1‑139 CCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGG > 1:593841/1‑150 CCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGG < 1:433174/150‑1 CCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGG > 1:358272/1‑150 CCATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGG < 1:1130347/150‑1 CATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGGC < 1:1452251/150‑1 ACCCACCTGGCCAACGGCCTGCCTCATCTCACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATCGTCAACTCCGGGCTGAAGTACCCACAGCGGCGCATTACCCAGAACCTCGCCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5976322‑5976471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccATCCTTGGGCAGGTCGGCGGGGGCGAGGTTCTGGGTAATGCGCCGCTGTGGGTACTTCAGCCCGGAGTTGACGATGGCGCTGCGCACCCGGTCCTTGCTTTCCTTGACCGTGGTTTCCGGCAGGCCGACCAGGGTGAGATGAGGCAGGC < NC_002947/5976486‑5976338 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |