| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6083635 = | 65 (1.090) | 5 (0.090) | 5/218 | NT | 8.6% | intergenic (‑44/+224) | purE/PP_5337 | 5‑(carboxyamino)imidazole ribonucleotide mutase/LysR family transcriptional regulator |
| ? | NC_002947 | 6083667 = | 47 (0.860) | intergenic (‑76/+192) | purE/PP_5337 | 5‑(carboxyamino)imidazole ribonucleotide mutase/LysR family transcriptional regulator | |||||
AAAAGTTGTCCCACGAGACAGCTTGCCCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGGCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6083791‑6083635‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcttgtCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGGGGTCGACGA > NC_002947/6083667‑6083814 AAAAGTTGTCCACCGAGACAGCTTGTCATTTGATCCGATATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGT < 2:904084/150‑1 AAGTTGTCCCACGAGACAGCTTGCCCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGG < 2:183046/150‑1 CCACGAGACAGCTTGCCCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGGC < 1:1638519/143‑1 CCACGAGACAGCTTGCCCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGGC > 2:1638519/1‑143 TTGCCCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCGTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCAGGTGGGCCGGCGTGGCTTGTCATACGGATTCTGAA < 2:49625/150‑1 CCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTG < 1:1228695/125‑1 CCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTG > 2:1228695/1‑125 CAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGGCTT > 1:173578/1‑93 CAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGGCTT < 2:173578/93‑1 AAGCCACGCCGGCCCACCTGCGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTA < 2:842948/82‑1 AAGCCACGCCGGCCCACCTGCGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTA > 1:842948/1‑82 CCACGCCGGCCCACCTGCGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGG > 1:243288/1‑126 CCACGCCGGCCCACCTGCGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGG < 2:243288/126‑1 GCGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGG < 1:1072549/150‑1 CGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGGG < 2:935890/150‑1 CGTGGCTTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGGG < 1:242950/150‑1 TTGTCATACGGATTCTGAATCGACCAGGTCGGCCGCAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGGCTCGTGGGACAACTTTTTCCTGCTGCCTCGGGGTCGAC < 2:876549/150‑1 TTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGGGGTCGAC > 1:1047727/1‑150 TTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAA < 2:1213862/100‑1 TTGTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAA > 1:1213862/1‑100 GTCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGGGGTCGACGA < 1:1154912/150‑1 AAAAGTTGTCCCACGAGACAGCTTGCCCTTTGATCCGGCATGTGCTTGTAGGGGTGGGCGGCCAGCCTTTAAATACGTTACAATCCCGCGCCTTCGGCCGACCTGGTCGATTCAGAATCCGTATGACAAGCCACGCCGGCCCACCTGCGTGGCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6083791‑6083635‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcttgtCATACGGATTCTGAATCGACCAGGTCGGCCGAAGGCGCGGGATTGTAACGTATTTAAAGGCTGGCCGCCCACCCCTACAAGCACATGCCGGATCAAAGGGCAAGCTGTCTCGTGGGACAACTTTTTCCTGCTGCCTCGGGGTCGACGA > NC_002947/6083667‑6083814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |