New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 596453	42 (0.700)	8 (0.130)	6/238	NT	15.0%	coding (414/711 nt)	PP_0507	ABC transporter ATP‑binding protein
	?	NC_002947	= 596487	49 (0.830)					coding (380/711 nt)	PP_0507	ABC transporter ATP‑binding protein

TCCGCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAACTGCTGGAAGAT  >  NC_002947/596313‑596602                                                                                                                                             |                                                                                                                                                      tCCGCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTgg                                                                                                                                              <  2:722837/150‑1 (MQ=255)  ccGCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTggg                                                                                                                                             <  2:1225607/150‑1 (MQ=255)   cGCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGt                                                                                                                                            <  2:116854/150‑1 (MQ=255)    gCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGaccaggcggcca                                                                                                                                           >  1:1107677‑M1/1‑138 (MQ=255)    gCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTc                                                                                                                                           >  2:496092/1‑150 (MQ=255)         cAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTcagcag                                                                                                                                      >  1:1480767/1‑150 (MQ=255)                      ggTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGgccgcc                                                                                                                         >  2:1359091/1‑150 (MQ=255)                      ggTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGAGGCGGCGAGCAGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGgccgcc                                                                                                                         <  2:184297/150‑1 (MQ=255)                       gTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGcccaggcggccagcacgctgctgacccacct                                                                                                                        >  1:999737‑M1/1‑119 (MQ=255)                       gTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGcccaggcggccagcacgctgctgacccacct                                                                                                                        >  1:999329‑M1/1‑119 (MQ=255)                       gTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCt                                                                                                                        <  1:302465/150‑1 (MQ=255)                        ttCGTCGGCGATCACCAGTTCCGGCTGGCCGATCAGTGCGCGGTCGGGGTGGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGcccaggcggccagcacgctgctgacccacctg                                                                                                                       <  2:999329‑M1/150‑33 (MQ=255)                        ttCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGCCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGcccaggcggccagcacgctgctgacccacctg                                                                                                                       <  2:999737‑M1/150‑33 (MQ=255)                            tcgGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTgg                                                                                                                              <  1:1645553/139‑1 (MQ=255)                            tcgGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTgg                                                                                                                              >  2:1645553/1‑139 (MQ=255)                            tcgGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCa                                                                                                                   >  1:1230001/1‑150 (MQ=255)                               gCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGaccaggcggccagcacgctgctgacccacctgggcctgg                                                                                                                <  2:1107677‑M1/150‑40 (MQ=255)                                  aTCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTg                                                                                                             <  2:241634/150‑1 (MQ=255)                                   tCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGc                                                                                                            >  1:1554557/1‑150 (MQ=255)                                      ccAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTTCTGGCCGCCTGGTCAACACTGCCAt                                                                                                         <  1:1041018/150‑1 (MQ=255)                                       cAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATg                                                                                                        <  1:201044/150‑1 (MQ=255)                                                   gCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGGCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGgc                                                                                            >  1:1350933/1‑150 (MQ=255)                                                           gTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGaccaggcggccagcacgctgctgacccac                                                                                                                          >  1:462028‑M1/1‑83 (MQ=255)                                                           gTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGaccaggcggccagcacgctgctgacccac                                                                                                                          <  2:462028‑M1/112‑30 (MQ=255)                                                             gcgcGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTg                                                                                  <  2:529024/150‑1 (MQ=255)                                                              cgcgGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGc                                                                                 <  2:963184/150‑1 (MQ=255)                                                               gcgggcggCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCg                                                                                <  2:1230001/150‑1 (MQ=255)                                                                cgggcggCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCgg                                                                               <  1:1359091/150‑1 (MQ=255)                                                                           gACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCga                                                                       >  2:897580/1‑147 (MQ=255)                                                                           gACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCga                                                                       <  1:897580/147‑1 (MQ=255)                                                                           gACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGaa                                                                    >  2:1510237/1‑150 (MQ=255)                                                                                    ctgctgGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCCGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCggcaggg                                                           <  2:862896/150‑1 (MQ=255)                                                                                     tgctgGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTgcg                                                                          >  1:658287/1‑134 (MQ=255)                                                                                     tgctgGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTgcg                                                                          <  2:658287/134‑1 (MQ=255)                                                                                      gctgGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCggcagggca                                                         <  2:1350933/150‑1 (MQ=255)                                                                                          gCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTc                                                     >  1:1515234/1‑150 (MQ=255)                                                                                                cGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGtt                                               <  2:119310/150‑1 (MQ=255)                                                                                                    aGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCa                                           <  1:496092/150‑1 (MQ=255)                                                                                                    aGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCa                                           >  1:155036/1‑150 (MQ=255)                                                                                                         gTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTAc                                      <  1:581322/150‑1 (MQ=255)                                                                                                             gcgcggcgGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCgag                                  <  2:1480767/150‑1 (MQ=255)                                                                                                                 ggcgggcgAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGa                              >  2:1343085/1‑150 (MQ=255)                                                                                                                          gCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGc                                                                                 <  2:1135730/90‑1 (MQ=255)                                                                                                                          gCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGc                                                                                 >  1:1135730/1‑90 (MQ=255)                                                                                                                          gCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGgcagca                     >  2:1047294/1‑150 (MQ=255)                                                                                                                              ggCAGGGTCGCCCAGGCCCGGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGtt                 <  2:1408401/150‑1 (MQ=255)                                                                                                                              ggCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGtt                 <  1:1510237/150‑1 (MQ=255)                                                                                                                               gCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTg                >  1:1027939/1‑150 (MQ=255)                                                                                                                                cAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCCGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGa               >  1:1032029/1‑150 (MQ=255)                                                                                                                                   ggTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAAct            >  2:684703/1‑150 (MQ=255)                                                                                                                                         ccaggcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTcctgggcgaccctgccatgctcgcccgccgcgccgacagcctgtcgatcggccagcagcagcgggtcgccgccgcccgcgcactgatcggccagcctgaactggtgatcgc      <  2:1107677‑M2/150‑112 (MQ=255)                                                                                                                                         ccaggcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAACTGCTGGa      >  2:865834/1‑150 (MQ=255)                                                                                                                                         ccaggcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAACTGCTGGa      >  1:1520333/1‑150 (MQ=255)                                                                                                                                          caggcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAActgc          >  2:258126/1‑145 (MQ=255)                                                                                                                                          caggcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAActgc          <  1:258126/145‑1 (MQ=255)                                                                                                                                             gcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATg                                                                                                        >  2:541654/1‑48 (MQ=255)                                                                                                                                             gcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATg                                                                                                        <  1:541654/48‑1 (MQ=255)                                                                                                                                             gcccaggTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAACTGCTGGAAGat  <  2:1520333/150‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                      TCCGCATCCAGTGCCGAGGTCGGTTCGTCGGCGATCACCAGTTCAGGCTGGCCGATCAGTGCGCGGGCGGCGGCGACCCGCTGCTGCTGGCCGATCGACAGGCTGTCGGCGCGGCGGGCGAGCATGGCAGGGTCGCCCAGGCCCAGGTGGGTCAGCAGCGTGCTGGCCGCCTGGTCAACACTGCCATGGCGCTGCTCGGCGCGTGCCTTGCGGCTGCGCGAGAAGCGGCAGGGCAGTTCGACGTTTTCACGTACCGAGAGGAACGGCAGCAGGTTGAACTGCTGGAAGAT  >  NC_002947/596313‑596602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.