New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 796843	57 (0.950)	3 (0.060)	3/208	NT	5.4%	intergenic (+42/‑148)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	= 796881	55 (1.060)					intergenic (+80/‑110)	PP_0681/PP_0682	hypothetical protein/inner membrane protein

CCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCAT  >  NC_002947/796695‑796992                                                                                                                                                     |                                                                                                                                                      ccGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCg                                                                                                                                                      <  2:1011014/150‑1 (MQ=255)   gATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCt                                                                                                                                                    >  2:1631009/1‑150 (MQ=255)    aTGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCATTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTc                                                                                                                                                   >  1:130033/1‑150 (MQ=255)           gCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAgg                                                                                                                                            >  2:264544/1‑150 (MQ=255)           gCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAgg                                                                                                                                            <  1:238381/150‑1 (MQ=255)               aTCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACa                                                                                                                                        >  2:743655/1‑150 (MQ=255)               aTCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACa                                                                                                                                        >  1:210616/1‑150 (MQ=255)                   ggTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCAt                                                                                                                                    <  1:1369810/150‑1 (MQ=255)                    gtgtCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATc                                                                                                                                   <  1:955247/150‑1 (MQ=255)                       tCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGc                                                                                                                                <  1:376324/150‑1 (MQ=255)                         tGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCt                                                                                                                                                    >  1:335721/1‑128 (MQ=255)                         tGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCt                                                                                                                                                    <  2:335721/128‑1 (MQ=255)                         tGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCtt                                                                                                                              >  2:928621/1‑150 (MQ=255)                           cATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGACCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGc                                                                                                                            >  1:1178281/1‑150 (MQ=255)                             tttGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGCGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCtg                                                                                                                          >  1:511148/1‑150 (MQ=255)                              ttGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCtgt                                                                                                                         <  2:974356/150‑1 (MQ=255)                                gCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTgg                                                                                                                       >  1:788097/1‑150 (MQ=255)                                gCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTgg                                                                                                                       >  1:812621/1‑150 (MQ=255)                                  agccgcAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGa                                                                                                                     <  1:965074/147‑1 (MQ=255)                                  aGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGTGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGa                                                                                                                     <  1:127010/150‑1 (MQ=255)                                       aagTGGCGGCGGGTCAATGGTGAGCGGTGTCGAAACTTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGATTGCCGGGGTCGTTTTGCGGCCCATCGCGACACAAGGCGGCTCCCACAGGTTCAGCATCGGCTTGCTGTGGGAGTGTg                                                                                                                >  2:487601‑M2/2‑149 (MQ=255)                                         gTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggc                                                                                                              >  2:210616‑M2/1‑147 (MQ=255)                                              ggcggATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACCCAAGCCCGCTCATACCAGCACAGCATGGGCTTGCTGTGGGAGTGTggccttgt                                                                                                         <  1:1599046‑M2/150‑9 (MQ=255)                                              ggcggATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgt                                                                                                         <  2:756439‑M1/150‑47 (MQ=255)                                              ggcggATAAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgt                                                                                                         >  1:96802‑M2/1‑142 (MQ=255)                                                   aTCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgtgtcgc                                                                                                    >  1:743655‑M2/1‑137 (MQ=255)                                                       aTGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCtgtg                                                                                                                        <  1:600803/126‑1 (MQ=255)                                                       aTGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCtgtg                                                                                                                        >  2:600803/1‑126 (MQ=255)                                                        tGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATTGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCa                                                                                               <  2:1517269/150‑1 (MQ=255)                                                              gCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCATGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGc                                                                                         <  1:1506206/150‑1 (MQ=255)                                                                ggTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCgg                                                                                       >  2:266220/1‑150 (MQ=255)                                                                 gtgtCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGa                                                                                      <  1:1631009/150‑1 (MQ=255)                                                                     cGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgt                                                                                                         <  2:824875‑M2/127‑9 (MQ=255)                                                                     cGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgt                                                                                                         >  1:824875‑M2/1‑119 (MQ=255)                                                                        aaCCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCca                                                                                                                                                <  2:1002289/85‑1 (MQ=255)                                                                        aaCCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCca                                                                                                                                                >  1:1002289/1‑85 (MQ=255)                                                                          ccTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATTGCGACACAAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggcc                                                                                            <  2:388726‑M1/135‑60 (MQ=255)                                                                          ccTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATTGCGACACAAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggcc                                                                                            >  1:388726‑M1/1‑76 (MQ=255)                                                                             gggggATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCggg                                                                          >  1:393354/1‑150 (MQ=255)                                                                                 gATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGag                                                                                     >  1:913113/1‑135 (MQ=255)                                                                                 gATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGag                                                                                     <  2:913113/135‑1 (MQ=255)                                                                                 gATTACCAGTTTCATCCTGAGACCTGAAGAAACGCGCGGCCTCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCttt                                                                      <  2:130033/150‑1 (MQ=39)                                                                                      ccAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTgg                                                                                                                       <  2:1077833/96‑1 (MQ=255)                                                                                      ccAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTgg                                                                                                                       >  1:1077833/1‑96 (MQ=255)                                                                                      ccAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACAAAAGGCCGCTCCCACTGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTg                                                                 >  1:1019113/1‑150 (MQ=255)                                                                                                 cTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTACCACAGGTACAGCATCGGCTTGCTGTGGGAGGGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTTCTGTAACAGGtggc                                                      >  1:1215149/1‑150 (MQ=255)                                                                                                  tGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGtggct                                                     <  2:788097/150‑1 (MQ=255)                                                                                                   gagaCCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGtggctg                                                    <  2:812621/150‑1 (MQ=255)                                                                                                    agaCCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGTAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGtggctgg                                                   <  2:393354/150‑1 (MQ=255)                                                                                                    agaCCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGtggctgg                                                   <  1:266220/150‑1 (MQ=255)                                                                                                          gaagaaTGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAAACACCCCCGGGGTTTTGCTGTAACAGGTGGCTGGCTATAc                                             >  1:86247/1‑150 (MQ=38)                                                                                                            agaaTGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTc                                           <  1:928621/150‑1 (MQ=255)                                                                                                                 gCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGt                                      >  2:869570/1‑150 (MQ=255)                                                                                                                 gCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGt                                      <  1:121702/150‑1 (MQ=255)                                                                                                                     gggCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAg                                                                                              >  2:541164/1‑90 (MQ=255)                                                                                                                     gggCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAg                                                                                              <  1:541164/90‑1 (MQ=255)                                                                                                                       gCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCttt                                >  2:336943/1‑150 (MQ=255)                                                                                                                         cGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCttttt                              >  2:390214/1‑150 (MQ=255)                                                                                                                          gCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCACGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCtttttt                             >  2:1309338/1‑150 (MQ=255)                                                                                                                           cTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTa                            >  2:600185/1‑150 (MQ=255)                                                                                                                            tttGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAg                           >  2:307477/1‑150 (MQ=255)                                                                                                                                 ggCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgtgtcgcaatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccagg                                     >  1:388726‑M2/1‑59 (MQ=255)                                                                                                                                 ggCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgtgtcgcaatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccagg                                     <  2:388726‑M2/135‑77 (MQ=255)                                                                                                                                   cccATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCg                                                                                        >  1:80555/1‑82 (MQ=255)                                                                                                                                   cccATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCg                                                                                        <  2:80555/82‑1 (MQ=255)                                                                                                                                    ccATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCtga                   <  1:264544/150‑1 (MQ=255)                                                                                                                                    ccATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCtga                   >  2:1485834/1‑150 (MQ=255)                                                                                                                                    caaTCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGTCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCtga                   <  1:622579/148‑1 (MQ=255)                                                                                                                                     cATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCtgat                  <  1:336943/150‑1 (MQ=255)                                                                                                                                      aTCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGt                                                                <  2:977383/103‑1 (MQ=255)                                                                                                                                      aTCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGt                                                                >  1:977383/1‑103 (MQ=255)                                                                                                                                       tCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCtgatga                >  2:1469877/1‑150 (MQ=255)                                                                                                                                         gcgACACAAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcgacaccgctcaccattgat              >  1:743655‑M1/1‑13 (MQ=255)                                                                                                                                          cgACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACCGGTGGCTGGCTATACTCGCCGGCGCTTTTTTAGTCCCCTGATGAGTc             <  2:511148/150‑1 (MQ=255)                                                                                                                                          cgACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTc             <  2:1599046/150‑1 (MQ=255)                                                                                                                                              acaAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcgacaccgctcaccatttatccgcc         >  1:96802‑M1/1‑8 (MQ=255)                                                                                                                                              acaAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcg                                <  2:824875‑M1/127‑120 (MQ=255)                                                                                                                                              acaAGGCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcg                                >  1:824875‑M1/1‑8 (MQ=255)                                                                                                                                              acaAGGCCacactcccacagcaagcccatgctgtgctggtatgagcgggcttgggtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcgacaccgctcaccattgatccgcc         <  1:1599046‑M1/150‑143 (MQ=255)                                                                                                                                              acaAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTggccttgtgtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcgacaccgctcaccattgatccgcc         <  2:756439‑M2/150‑105 (MQ=255)                                                                                                                                                   gCCacactcccacagcaagccgatgctgtacctgtgggagcggccttgtgtcgcgatgggccgcaaagcggccccggcattcttcaggtctcaggatgaaactggtaatcccccaggttgcgacaccgctcaccattgatccgccgcaac    >  2:210616‑M1/1‑3 (MQ=255)                                                                                                                                                   gCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGagca                                                                                   >  2:54185/1‑71 (MQ=255)                                                                                                                                                   gCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGagca                                                                                   >  2:1552659/1‑71 (MQ=255)                                                                                                                                                   gCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGagca                                                                                   <  1:54185/71‑1 (MQ=255)                                                                                                                                                   gCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGagca                                                                                   <  1:1552659/71‑1 (MQ=255)                                                                                                                                                     cacactcccacagcaagccgatgctgaacctgtgggagccgccttgtgtcgcgatgggccgcaaaacgaccccggcaatcttcaggtctcaggatgaaactggtaatcccccaagtttcgacaccgctcaccattgacccgccgccactt  >  2:487601‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACAGGTACAGCATCGGCTTGCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCAT  >  NC_002947/796695‑796992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.