BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1037796	49 (0.820)	6 (0.120)	5/194	NT	10.6%	intergenic (+38/+78)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1037828	62 (1.280)	6 (0.120)	5/194	NT	10.6%	intergenic (+70/+46)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase

Only 100 of 101 total aligned reads displayed.

GCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCG  >  NC_002947/1037649‑1037944

gCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTTTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCaaa                                                                                                                                                    >  2:1382564/1‑150 (MQ=255)

gCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCaaa                                                                                                                                                    <  1:1467529/150‑1 (MQ=255)

 ccAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAt                                                                                                                                                   >  2:895595/1‑150 (MQ=255)

 ccAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAt                                                                                                                                                   <  1:776564/150‑1 (MQ=255)

 ccAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAt                                                                                                                                                   <  1:193760/150‑1 (MQ=255)

         tGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGcc                                                                                                                                           >  1:1170912/1‑150 (MQ=255)

          ggTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCt                                                                                                                                          >  2:1565746/1‑150 (MQ=255)

            tgtgtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTc                                                                                                                                        <  2:541072/150‑1 (MQ=255)

             gtgtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCt                                                                                                                                       <  1:1465744/150‑1 (MQ=255)

                     tAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGCGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTgcg                                                                                                                               <  2:947668/150‑1 (MQ=255)

                        aTTTGGAGGAAGTGCGGCGGGTGGGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTg                                                                                                                            >  1:663058/1‑150 (MQ=255)

                         tttGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCtt                                                                                                                                  <  1:1257671/143‑1 (MQ=255)

                         tttGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCtt                                                                                                                                  >  2:1257671/1‑143 (MQ=255)

                             gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt                                                                                                                       >  1:54526/1‑150 (MQ=255)

                             gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt                                                                                                                       <  2:1515551/150‑1 (MQ=255)

                             gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt                                                                                                                       <  1:1565746/150‑1 (MQ=255)

                             gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATACGTAGCCTTCTGGCTTTCGCTGTACgt                                                                                                                       >  2:445998/1‑150 (MQ=255)

                              aggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgtg                                                                                                                      <  1:279025/150‑1 (MQ=255)

                                         cggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggc                                                                                                           >  2:54526‑M2/1‑139 (MQ=255)

                                           ggTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGCCTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGATCCCAcacgtacagcgcaacccagaaggctacgcatttgggagcgggctt                                                                                                         <  2:17848‑M1/150‑46 (MQ=255)

                                           ggTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggctt                                                                                                         <  1:466630‑M1/150‑46 (MQ=255)

                                             ggaGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc                                                                                                       >  1:239817‑M2/2‑135 (MQ=255)

                                              ggggcgGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcc                                                                                                      >  2:663058‑M2/3‑134 (MQ=255)

                                                 gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg                                                                                                                   <  1:1134845‑M2/134‑4 (MQ=255)

                                                 gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg                                                                                                                   >  2:1134845‑M2/1‑131 (MQ=255)

                                                    ggAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaa                                                                                                >  2:1218118‑M2/1‑128 (MQ=255)

                                                     gAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggctt                                                                                                         >  1:222474‑M2/1‑127 (MQ=255)

                                                     gAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggctt                                                                                                         <  2:222474‑M2/140‑14 (MQ=255)

                                                       aGGGCCGGTTTTTGCCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAagca                                                                                             <  1:605135/150‑1 (MQ=255)

                                                         agCAGTTGTATACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCATGCAAACCCGCTCCCAAATGTGTACCCTTCTGGCTTGCGCTCTACGTGTGGGCACGGGCTTGCACGCGAagcagc                                                                                           >  2:76441/2‑150 (MQ=255)

                                                              gtgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGccgccg                                                                                      >  1:1134328/1‑150 (MQ=255)

                                                                         gCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCa                                                                           >  1:701615/1‑150 (MQ=255)

                                                                           gggACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAgg                                                                         <  1:980586/150‑1 (MQ=255)

                                                                             gACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGtt                                                                       >  2:1594645/1‑150 (MQ=255)

                                                                                  gCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttc                                                                  >  2:1091656/1‑150 (MQ=255)

                                                                                    cGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcac                                                                >  2:977598/1‑150 (MQ=255)

                                                                                     ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcact                                                               <  2:92188/150‑1 (MQ=255)

                                                                                           gTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcattt                                                                                                                     >  2:871382‑M1/1‑57 (MQ=255)

                                                                                           gTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcattt                                                                                                                     <  1:871382‑M1/90‑34 (MQ=255)

                                                                                           gTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACg                                                         >  2:1580481/1‑150 (MQ=255)

                                                                                             tCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGTCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGc                                                       <  1:1594645/150‑1 (MQ=255)

                                                                                               gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAagcag                                                                                            <  1:1322084/111‑1 (MQ=255)

                                                                                               gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAagcag                                                                                            >  2:1322084/1‑111 (MQ=255)

                                                                                                 gagagTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAgg                                                   >  1:1526497/1‑150 (MQ=255)

                                                                                                      tCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg                                                                                                                   >  1:1132168‑M2/1‑78 (MQ=255)

                                                                                                      tCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg                                                                                                                   <  2:1132168‑M2/81‑4 (MQ=255)

                                                                                                      tCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCGCGTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTc                                              >  1:1162652/1‑150 (MQ=255)

                                                                                                       ccTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCg                                             <  1:977598/150‑1 (MQ=255)

                                                                                                        cTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGAGCTGTACGTGTGGGAGCGGGCTTGCCCGCGCAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCgg                                            >  1:187641/1‑150 (MQ=255)

                                                                                                           tgatgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCaa                                         >  2:201593/1‑150 (MQ=255)

                                                                                                            gatgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAAt                                        >  2:1217786/1‑150 (MQ=255)

                                                                                                              tgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcgcgtacagcgcaagccagaaggctacgcatttgggagcggg                                                                                                            <  2:341262‑M1/80‑43 (MQ=255)

                                                                                                              tgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcgcgtacagcgcaagccagaaggctacgcatttgggagcggg                                                                                                            >  1:341262‑M1/1‑38 (MQ=255)

                                                                                                                 cTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGc                                   <  1:1580481/150‑1 (MQ=255)

                                                                                                                    tgGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGt                                                                                                                     <  2:584487‑M2/65‑2 (MQ=255)

                                                                                                                    tgGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGt                                                                                                                     >  1:584487‑M2/1‑64 (MQ=255)

                                                                                                                     ggcggcCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcggg                                                                                                            >  2:1429937‑M2/1‑63 (MQ=255)

                                                                                                                     ggcggcCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcggg                                                                                                            <  1:1429937‑M2/73‑11 (MQ=255)

                                                                                                                           ctgttCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcag                         >  1:1643278/4‑150 (MQ=255)

                                                                                                                           ctctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcag                         >  1:478753/1‑150 (MQ=255)

                                                                                                                            tctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagg                        <  2:1273875/150‑1 (MQ=255)

                                                                                                                              ttCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcc                      >  2:1218118‑M1/1‑22 (MQ=255)

                                                                                                                                cgcgGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTa                                                                                <  1:510193/90‑1 (MQ=255)

                                                                                                                                cgcgGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTa                                                                                >  2:510193/1‑90 (MQ=255)

                                                                                                                                  ggggCAAGCCCGCTCCCAAATGCGTAGCGTTCTGGCTTGCGCTGTACGTGGGGGAGCGGGATTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcaggg                  <  2:213952/149‑1 (MQ=255)

                                                                                                                                   gggCACGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACagggcagggc                 <  1:895595/150‑1 (MQ=255)

                                                                                                                                   gggCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACagggcagggc                 <  2:54979/150‑1 (MQ=255)

                                                                                                                                    ggCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcccc                >  2:663058‑M1/1‑16 (MQ=255)

                                                                                                                                     gCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcc               >  1:239817‑M1/1‑15 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttc                       >  1:222474‑M1/1‑13 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttc                       <  2:222474‑M1/140‑128 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAAATGCGTAGCCTTCTGGGTTGCGCTGTACGTGtgggatcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccaggcccgccaggtaaacacctgcccttcccgcctcacc             <  2:17848‑M2/150‑106 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacc             <  1:466630‑M2/150‑106 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCttt                                               <  2:61363/116‑1 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCttt                                               >  1:61363/1‑116 (MQ=255)

                                                                                                                                       aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt             >  2:1509513/1‑150 (MQ=255)

                                                                                                                                         gCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccg           >  2:54526‑M1/1‑11 (MQ=255)

                                                                                                                                         gCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGa           <  1:1509513/150‑1 (MQ=255)

                                                                                                                                         gCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGa           >  2:496117/1‑150 (MQ=255)

                                                                                                                                          cccGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgcc                                                                                       >  2:1429937‑M1/1‑10 (MQ=255)

                                                                                                                                          cccGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgcc                                                                                       <  1:1429937‑M1/73‑64 (MQ=255)

                                                                                                                                          cccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGCGtgggagcgggcttgcccgcgaagaggccgccacagtca                                                                                <  2:341262‑M2/80‑39 (MQ=255)

                                                                                                                                          cccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGCGtgggagcgggcttgcccgcgaagaggccgccacagtca                                                                                >  1:341262‑M2/1‑42 (MQ=255)

                                                                                                                                            cGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTCGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCCACGGCCAGGCTTGCGGCAATCTTGCGCTGCCACAGGGCAGCGCCCGTGAtgt        >  2:201288/1‑150 (MQ=255)

                                                                                                                                             gCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCATTTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcag                    <  2:807443/137‑1 (MQ=255)

                                                                                                                                             gCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcag                    >  1:807443/1‑137 (MQ=255)

                                                                                                                                               tCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTa     <  2:1526497/150‑1 (MQ=255)

                                                                                                                                                cccAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTAc    <  2:478753/150‑1 (MQ=255)

                                                                                                                                                cccAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTAc    <  1:1091656/150‑1 (MQ=255)

                                                                                                                                                 ccAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgc                   <  1:1134845‑M1/134‑132 (MQ=255)

                                                                                                                                                 ccAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgc                   >  2:1134845‑M1/1‑3 (MQ=255)

                                                                                                                                                 ccAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacagga                                                                        <  2:1132168‑M1/81‑79 (MQ=255)

                                                                                                                                                 ccAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacagga                                                                        >  1:1132168‑M1/1‑3 (MQ=255)

                                                                                                                                                  cAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGc                              >  2:59513/1‑122 (MQ=255)

                                                                                                                                                  cAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGc                              <  1:59513/122‑1 (MQ=255)

                                                                                                                                                  cAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGACAGGCGTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCg  >  1:513880/1‑150 (MQ=255)

                                                                                                                                                   acacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgcca                                                                                      <  2:584487‑M1/65‑65 (MQ=255)

                                                                                                                                                   acacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgcca                                                                                      >  1:584487‑M1/1‑1 (MQ=255)

                                                                                                                                                   aaaTGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaac                                                             <  1:871382‑M2/90‑58 (MQ=255)

                                                                                                                                                   aaaTGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaac                                                             >  2:871382‑M2/1‑33 (MQ=255)

GCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCG  >  NC_002947/1037649‑1037944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.