New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1296508 =	NA (NA)	8 (0.130)	7/240	NT	NA	intergenic (‑255/‑311)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296528 =	NA (NA)					intergenic (‑275/‑291)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase

GCAAGCCTAGATGGATTTGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTC  >  NC_002947/1296359‑1296630                                                                                                                                                      |                                                                                                                           gCAAGCCTAGATGGATTTGGGGAAGGATGGGGGAGGGGAAGTCTGGCGAAGGTTCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCgg                                                                                                                            <  1:918924/150‑1 (MQ=255)       cTAGATGGATTTGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTgcg                                                                                                                      >  2:849943/1‑150 (MQ=255)        tAGATGGATTTGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTgcgc                                                                                                                     <  2:333679/150‑1 (MQ=255)           aTGGATTTGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGt                                                                                                                  >  2:373250/1‑150 (MQ=255)                tttGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCgcgc                                                                                                             >  1:1476531/1‑150 (MQ=255)                tttGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCgcgc                                                                                                             >  1:708235/1‑150 (MQ=255)                  tGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCgcag                                                                                                           <  1:886552/150‑1 (MQ=255)                  tGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCgcag                                                                                                           <  1:886378/150‑1 (MQ=255)                           aTGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCgcagc                                                                                                          >  1:1032842/1‑142 (MQ=255)                           aTGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCgcagc                                                                                                          <  2:1032842/142‑1 (MQ=255)                               gggaggggaAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGgtg                                                                                              >  1:1468510/1‑150 (MQ=255)                               gggaggggaAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGgtg                                                                                              >  1:614711/1‑150 (MQ=255)                                   ggggaAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACg                                                                                          >  1:410857/1‑150 (MQ=255)                                       aaGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCtt                                                                                      <  2:1051348/150‑1 (MQ=255)                                         gTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCa                                                                                    <  1:1011473/150‑1 (MQ=255)                                         gTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCa                                                                                    <  2:1476531/150‑1 (MQ=255)                                          tCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAg                                                                                   >  2:795564/1‑150 (MQ=255)                                          tCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGACTTCAg                                                                                   >  1:210979/1‑150 (MQ=255)                                           cTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGt                                                                                  <  2:1468510/150‑1 (MQ=255)                                              gAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTcc                                                                               <  1:795564/150‑1 (MQ=255)                                                    gTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCg                                                                         >  1:929076/1‑150 (MQ=255)                                                          gAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCt                                                                                                                    >  2:1188861/1‑101 (MQ=255)                                                          gAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCt                                                                                                                    <  1:1188861/101‑1 (MQ=255)                                                             tAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTc                                                                                >  2:831998/1‑134 (MQ=255)                                                             tAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTc                                                                                <  1:831998/134‑1 (MQ=255)                                                             tAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACa                                                                <  2:929076/150‑1 (MQ=255)                                                                tCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTc                                                                                                                 <  1:764411/98‑1 (MQ=255)                                                                tCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTc                                                                                                                 >  2:764411/1‑98 (MQ=255)                                                                tCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAg                                                                                                 <  2:1055001/114‑1 (MQ=255)                                                                tCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAg                                                                                                 >  1:1055001/1‑114 (MQ=255)                                                                tCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAttt                                                             >  1:1544564/1‑150 (MQ=255)                                                                tCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAttt                                                             >  2:1224903/1‑150 (MQ=255)                                                                 cTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACAtttt                                                            <  1:661526/150‑1 (MQ=255)                                                                   gATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCATCGACGCTGACATTTTGa                                                          >  2:1612474/1‑150 (MQ=255)                                                                        cGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaag                                                     >  2:1249309/1‑150 (MQ=255)                                                                         ggACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCggg                                                                                                                           <  2:922399/79‑1 (MQ=255)                                                                         ggACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCggg                                                                                                                           >  1:922399/1‑79 (MQ=255)                                                                         ggACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaaga                                                    >  1:1269221/1‑150 (MQ=255)                                                                             cGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAaaaagaaaag                                                >  2:420735/1‑150 (MQ=255)                                                                              gggCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGAAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAgg                                               <  2:516643/150‑1 (MQ=255)                                                                               ggCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGc                                              <  2:1522870/150‑1 (MQ=255)                                                                               ggCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCACGCCCTTCCGGGCTGCGCTGGCGCGCAGCAAACATGAGGTGTACGGCTGCAGTTTCGCAGCGACGCTGACAGTTTGAAAAAGAAACGGc                                              >  2:1629272/1‑150 (MQ=21)                                                                                 cccTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCgg                                            <  1:1224903/150‑1 (MQ=255)                                                                                           ggTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGt                                  >  2:235876/1‑150 (MQ=255)                                                                                            gTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGTAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTa                                 >  2:1292411/1‑150 (MQ=255)                                                                                             tAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGTCCGGTAg                                <  2:1422011/150‑1 (MQ=255)                                                                                               aaCCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGCGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAggg                              <  1:1249309/150‑1 (MQ=255)                                                                                                 cccGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGcc                            >  1:1159630/1‑150 (MQ=255)                                                                                                  ccGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCa                           >  1:657929/1‑150 (MQ=255)                                                                                                   cGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGa                                                                                                  >  1:1281608/1‑78 (MQ=255)                                                                                                   cGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGa                                                                                                  <  2:1281608/78‑1 (MQ=255)                                                                                                    gCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTgcg                                                                                                                      <  2:323834/57‑1 (MQ=255)                                                                                                    gCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTgcg                                                                                                                      >  1:323834/1‑57 (MQ=255)                                                                                                     cTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgcc                        <  2:708235/150‑1 (MQ=255)                                                                                                       ccTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGCAATGTAGGGTCGCAGCTGCGATGGCATCTTGGGATTGTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAgccgc                      <  1:444514/150‑1 (MQ=14)                                                                                                         tACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCgg                                            >  2:244817/1‑126 (MQ=255)                                                                                                         tACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCgg                                            <  1:244817/126‑1 (MQ=255)                                                                                                         tACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCt                    >  1:1508701/1‑150 (MQ=255)                                                                                                              gggACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGAGATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGc               <  1:373250/150‑1 (MQ=255)                                                                                                                gACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCtt             >  1:1145511/1‑150 (MQ=40)                                                                                                                gACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCtt             >  1:1219982/1‑150 (MQ=40)                                                                                                                 aCCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCttt            <  1:1292411/150‑1 (MQ=39)                                                                                                                   cATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCgca                                                                                                            <  2:587743/52‑1 (MQ=255)                                                                                                                   cATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCgca                                                                                                            >  1:587743/1‑52 (MQ=255)                                                                                                                   cATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGt          >  2:938928/1‑150 (MQ=38)                                                                                                                        ttCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCt                                                                    >  2:870523/1‑87 (MQ=37)                                                                                                                        ttCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCt                                                                    <  1:870523/87‑1 (MQ=37)                                                                                                                        ttCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAggg     >  2:829027/1‑150 (MQ=33)                                                                                                                        ttCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAggg     >  2:627580/1‑150 (MQ=33)                                                                                                                         tCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGt    <  2:410857/150‑1 (MQ=32)                                                                                                                           cGTGTAGGAGATCACCCAGCCCTTCCTGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTc  <  1:1268763/150‑1 (MQ=14)                                                                                                                                                      |                                                                                                                           GCAAGCCTAGATGGATTTGGGGAAGGATGGGGGAGGGGAAGTCTGGAGTAGGTGCTGGAATAGTCTGATGCCGGACCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGACCATTGTTCCGTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTC  >  NC_002947/1296359‑1296630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.