New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1418455	53 (0.890)	4 (0.070)	4/226	NT	6.6%	intergenic (+16/+83)	PP_t14/PP_1241	tRNA‑Ser/hypothetical protein
	?	NC_002947	= 1418473	63 (1.120)					intergenic (+34/+65)	PP_t14/PP_1241	tRNA‑Ser/hypothetical protein

AAAGATTTGCGTTTTAAAAGAACGCTGGTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTAACGCAACCATCAGTTTT  >  NC_002947/1418306‑1418604                                                                                                                                                      |                                                                                                                                                      aaaGATTTGCGTTTTAAAAGAACGCTGGTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCC                                                                                                                                                       >  2:1324729‑M1/1‑150 (MQ=255)      tttGCGTTTTAAAAGAACGCTGGTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGaa                                                                                                                                                  <  1:1219691/150‑1 (MQ=255)         gCGTTTTAAAAGAACGCTGGTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCg                                                                                                                                               <  2:1281713/150‑1 (MQ=255)                    gAACGCTGGTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGg                                                                                                                                    >  1:1248149‑M2/1‑149 (MQ=255)                            gTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAg                                                                                                                                           <  2:743481/135‑1 (MQ=255)                            gTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAg                                                                                                                                           >  1:743481/1‑135 (MQ=255)                                  tgCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTa                                                                                                                      >  1:811400/1‑150 (MQ=255)                                  tgCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTa                                                                                                                      >  1:671414/1‑150 (MQ=255)                                  tgCGCAGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTCGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTa                                                                                                                      <  1:368179/150‑1 (MQ=255)                                       ggCATTGGAGAGATGCCGGAGTGGTCGAACGGGACCGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGaa                                                                                                                 <  1:926367/150‑1 (MQ=255)                                           ttGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCa                                                                                                             >  2:603459/1‑150 (MQ=255)                                                 agaTGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGAtt                                                                                                       <  2:671414/150‑1 (MQ=255)                                                        ggAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGaa                                                                                                                                             >  1:1107633/1‑105 (MQ=255)                                                        ggAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGaa                                                                                                                                             <  2:1107633/105‑1 (MQ=255)                                                                 gAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGaa                                                                                                                 >  2:1144269/1‑124 (MQ=255)                                                                 gAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGaa                                                                                                                 <  1:1144269/124‑1 (MQ=255)                                                                          ggATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTGTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGa                                                                              >  1:535423/1‑150 (MQ=255)                                                                            aTTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCcgaaagctttcgcttccag                                                                                                                                    <  1:99249‑M1/94‑20 (MQ=255)                                                                            aTTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAgc                                                                            <  1:1324729/150‑1 (MQ=255)                                                                            aTTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTGCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCcgaaagctttcgcttccag                                                                                                                                    >  2:99249‑M1/1‑75 (MQ=255)                                                                             ttCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAgcg                                                                           >  2:1344703/1‑150 (MQ=255)                                                                                 aaaTCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCaaa                                                                                                           <  1:136634/114‑1 (MQ=255)                                                                                 aaaTCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCaaa                                                                                                           >  2:136634/1‑114 (MQ=255)                                                                                      cGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCa                                                                  >  2:1307663/1‑150 (MQ=255)                                                                                       gTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCaa                                                                 <  2:811400/150‑1 (MQ=255)                                                                                               ggCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTAca                                                                                                   <  2:1339237/108‑1 (MQ=255)                                                                                               ggCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTAca                                                                                                   >  1:1339237/1‑108 (MQ=255)                                                                                                gCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAACGATTTATAGCAAGCATGCGAATTGCCCGAGCGCTTAAATCAAGAGCACGGa                                                        >  1:761825/1‑150 (MQ=255)                                                                                                gCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCgg                                                         <  1:1063283/149‑1 (MQ=255)                                                                                                gCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCgg                                                         >  2:1063283/1‑149 (MQ=255)                                                                                                gCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGa                                                        >  1:1437436/1‑150 (MQ=255)                                                                                                  aaCAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCcgaaagctttcgcttccaggggct                                                                                                                               >  2:262580‑M1/1‑53 (MQ=255)                                                                                                  aaCAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCcgaaagctttcgcttccaggggct                                                                                                                               <  1:262580‑M1/77‑25 (MQ=255)                                                                                                      gTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTtc                                                  >  2:123890/1‑150 (MQ=255)                                                                                                            aGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGc                                            <  1:123890/150‑1 (MQ=255)                                                                                                               gTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCaa                                                                 <  1:839632/126‑1 (MQ=255)                                                                                                               gTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGc                                         >  1:1512875/1‑150 (MQ=255)                                                                                                               gTTCAAATCCCTATCTCGCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCaa                                                                 >  2:839632/1‑126 (MQ=255)                                                                                                                ttCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGtt                                                                                                                       <  2:1119045/71‑1 (MQ=255)                                                                                                                ttCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGtt                                                                                                                       >  1:1119045/1‑71 (MQ=255)                                                                                                                   aaaTCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGa                                     >  2:1461644/1‑150 (MQ=255)                                                                                                                   aaaTCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGa                                     <  2:535423/150‑1 (MQ=255)                                                                                                                   aaaTCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGa                                     <  1:381045/150‑1 (MQ=255)                                                                                                                     aTCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGcc                                                                                 >  2:860313/1‑104 (MQ=255)                                                                                                                     aTCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTGTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTATCTAGCGGCCTGACt                                   >  1:532811/1‑150 (MQ=255)                                                                                                                     aTCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTAGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGcc                                                                                 <  1:860313/104‑1 (MQ=255)                                                                                                                         cTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTaaa                                                                     <  2:1631625/112‑1 (MQ=255)                                                                                                                         cTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTaaa                                                                     >  1:1631625/1‑112 (MQ=255)                                                                                                                         cTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGa                               >  1:1576087/1‑150 (MQ=255)                                                                                                                                tcCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTa                                                                                                                      <  2:1381778/56‑1 (MQ=255)                                                                                                                                tcCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTa                                                                                                                      >  1:1381778/1‑56 (MQ=255)                                                                                                                                 ccGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTaca                       <  2:1437436/150‑1 (MQ=255)                                                                                                                                   gCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACAcc                     >  2:1361462/1‑150 (MQ=255)                                                                                                                                   gCCATACAAGATCAAGCCCCGGGAAGCGAAAGCTTTCGGGACCTCATACGATATGACACAGTGTGATTGGCGTCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACAcc                     <  1:603459/150‑1 (MQ=255)                                                                                                                                     cATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTa                   >  1:54496/1‑150 (MQ=255)                                                                                                                                      aTACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTaa                  >  1:664838/1‑150 (MQ=255)                                                                                                                                      aTACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTaa                  <  2:1512875/150‑1 (MQ=255)                                                                                                                                        aCAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTAACg                >  2:204048/1‑150 (MQ=255)                                                                                                                                          aaGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGaa                                                       <  1:814760/109‑1 (MQ=255)                                                                                                                                          aaGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGaa                                                       >  2:814760/1‑109 (MQ=255)                                                                                                                                                 aGCCCCTGGAAGCGAAAGCTTTCGggggcttgatcttgtatggcggagagatagggatttgaaccctaggtactgtt                                                                                >  2:262580‑M2/1‑24 (MQ=255)                                                                                                                                                 aGCCCCTGGAAGCGAAAGCTTTCGggggcttgatcttgtatggcggagagatagggatttgaaccctaggtactgtt                                                                                <  1:262580‑M2/77‑54 (MQ=255)                                                                                                                                                  gCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTAcagcca                                                                                               >  1:784396/1‑61 (MQ=255)                                                                                                                                                  gCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTAcagcca                                                                                               <  2:784396/61‑1 (MQ=255)                                                                                                                                                  gCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTAACGCAACCATCAg      >  1:884624/1‑150 (MQ=255)                                                                                                                                                   ccccTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTAACGCAACCATCAGt     >  2:1324073/1‑150 (MQ=255)                                                                                                                                                      ccgaaagctttcgcttccaggggcttgatcttgtatggcggagagatagggatttgaaccctaggtactgttgccagtacaacggatttcgaatccgtcccgttcgaccactccggcatctctccaatgccgcgcatcataccagcgttc  >  1:1248149‑M1/1‑1 (MQ=255)                                                                                                                                                      cTGGAAGCGAAAGCTTTCGggggcttgatcttgtatggcggagagatagggatttgcaccctaggtactgttgccagtacaacggatttcgaat                                                          >  2:99249‑M2/1‑19 (MQ=255)                                                                                                                                                      cTGGAAGCGAAAGCTTTCGggggcttgatcttgtatggcggagagatagggatttgaaccctaggtactgttgccagtacaacggatttcgaat                                                          <  1:99249‑M2/94‑76 (MQ=255)                                                                                                                                                      |                                                                                                                                                      AAAGATTTGCGTTTTAAAAGAACGCTGGTATGATGCGCGGCATTGGAGAGATGCCGGAGTGGTCGAACGGGACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATACAAGATCAAGCCCCTGGAAGCGAAAGCTTTCGGGGGCTTTTTCGTTATGGAAGGCAAAGATTTACAGCCAGCATGCTAATTGCCCGAGCGCTTAAATCAAGAGCCCGGAAGCTTCTCGAGCGGCCTGACTGTGAGCTCTACACCTAACGCAACCATCAGTTTT  >  NC_002947/1418306‑1418604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.