New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 141958419 (0.320)6 (0.140) 6/176 NT 35.4% intergenic (‑67/+70) PP_1242/PP_1244 hypothetical protein/hypothetical protein
?NC_002947 = 1419614 8 (0.180)intergenic (‑97/+40) PP_1242/PP_1244 hypothetical protein/hypothetical protein

AACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGT  >  NC_002947/1419435‑1419732
                                                                                                                                                     |                                                                                                                                                    
atgcaggccgtgatccatgaaatggaagcggtacaggggctggtcgagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagcgcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                                                      >  2:25632‑M1/119‑150 (MQ=255)
   aGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAc                                                                                                                                                   >  1:1006785/1‑150 (MQ=255)
    gCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACt                                                                                                                                                  <  1:506740/150‑1 (MQ=255)
    gCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACt                                                                                                                                                  <  2:1210229/150‑1 (MQ=255)
         tGAGTGTTGTGTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCa                                                                                                                                             <  1:1304123/150‑1 (MQ=255)
             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTa                                                                                                                                                    <  1:737699/139‑1 (MQ=255)
             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTa                                                                                                                                                    >  2:737699/1‑139 (MQ=255)
             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCa                                                                                                                                             <  2:924525/146‑1 (MQ=255)
             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCa                                                                                                                                             >  1:924525/1‑146 (MQ=255)
             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGc                                                                                                                                         <  2:1006785/150‑1 (MQ=255)
               ttgttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGt                                                                                                                                       >  1:1255063/1‑150 (MQ=255)
               ttgttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCATGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTg                                                                                                                                          <  2:263011/147‑1 (MQ=255)
               ttgttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCATGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTg                                                                                                                                          >  1:263011/1‑147 (MQ=255)
                tgttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtca                                                                                                                                      >  1:402064‑M1/1‑134 (MQ=255)
                 ttgttCGCCTTTGTAGAAGCTGGTATTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGa                                                                                                                                     <  2:704740/147‑1 (MQ=255)
                 gttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGa                                                                                                                                     <  2:1109081/150‑1 (MQ=255)
                      cGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCt                                                                                                                                <  2:1161622/150‑1 (MQ=255)
                        ccTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCtgt                                                                                                                              >  1:559971/1‑150 (MQ=255)
                         cgtggtggATGCAGGTGTTGCCGACTGTGCTGGGTTCTGTTGTGTTGTCGGTGGGGATTGTTTTGTTTCCCTGGATTCTGTGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGAACTGTGCAGTGCGTGACGGCtgtg                                                                                                                             <  2:772909/148‑1 (MQ=38)
                                gAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCGGTGGTGACcc                                                                                                                      <  2:396262‑M2/150‑3 (MQ=255)
                                     aGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcgctgcacagtacctgtgg                                                                                                                 <  2:402064‑M1/150‑38 (MQ=255)
                                     aGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgg                                                                                                                 >  2:1255063‑M2/1‑143 (MQ=255)
                                       gTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtggga                                                                                                               >  2:523080‑M1/1‑111 (MQ=255)
                                       ctggtcgagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGa                                                                                                               >  1:996525‑M1/80‑150 (MQ=255)
                                           tcgagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                           >  2:535358‑M1/76‑150 (MQ=255)
                                           tGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgg                                                                                                           >  1:1617601‑M2/1‑137 (MQ=255)
                                            gCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAc                                                                                                                                                   >  2:432210/1‑109 (MQ=255)
                                            gCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAc                                                                                                                                                   <  1:432210/109‑1 (MQ=255)
                                            gCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcggg                                                                                                          >  2:559971‑M2/1‑136 (MQ=255)
                                             gagtcggcgttgatgcagttgcagatgcggtcgcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGc                                                                                                         >  2:1188034‑M1/74‑150 (MQ=255)
                                             ccGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggc                                                                                                         <  1:523080‑M1/150‑46 (MQ=255)
                                              cGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGc                                                                                                                                         <  2:289503/117‑1 (MQ=255)
                                              cGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGc                                                                                                                                         >  1:289503/1‑117 (MQ=255)
                                              cGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGa                                                                                                                         <  2:395029/133‑1 (MQ=255)
                                              cGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGa                                                                                                                         >  1:395029/1‑133 (MQ=255)
                                                  tgtgGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcc                                                                                                    <  1:1330006‑M2/150‑21 (MQ=255)
                                                   gtggtgGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgccc                                                                                                   >  2:150635‑M2/1‑129 (MQ=255)
                                                    tggtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                                                                   <  2:684618‑M2/133‑6 (MQ=255)
                                                    tggtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgt                                                                                                                   >  1:684618‑M2/1‑128 (MQ=255)
                                                    tggtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTCGTGACcctgtgggagcgggcgtgcccg                                                                                                  >  1:631692‑M2/1‑128 (MQ=255)
                                                           ttCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagag                                                                                           >  2:1330006‑M2/1‑121 (MQ=255)
                                                                  gtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGTGTGACGGCTGTGGTGACCCTGGGGGAGCGGGCGTGCCCGCGAAGAGGCCTGAc                                                                                    <  2:1551800/150‑1 (MQ=255)
                                                                             gcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                           >  1:1159295‑M1/42‑116 (MQ=255)
                                                                             gcatttacccacagagcctcacaccttgcattagcaggtcaGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                                                           <  2:1159295‑M1/75‑1 (MQ=255)
                                                                                      tttgtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagc                                                                                                             <  2:1195946‑M1/105‑42 (MQ=255)
                                                                                      tttgtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagc                                                                                                             >  1:1195946‑M1/1‑64 (MQ=255)
                                                                                      tttgtttCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAg                                                                <  1:350371/150‑1 (MQ=255)
                                                                                                tGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtggg                                                                                                                <  1:1340227‑M2/92‑9 (MQ=255)
                                                                                                tGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtggg                                                                                                                >  2:1340227‑M2/1‑84 (MQ=255)
                                                                                                       tGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaaga                                                                                            <  1:422834‑M2/105‑29 (MQ=255)
                                                                                                       tGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaaga                                                                                            >  2:422834‑M2/1‑77 (MQ=255)
                                                                                                                   gCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGc                                   <  1:396262/150‑1 (MQ=255)
                                                                                                                       gCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggc                                                                                                         >  1:399152‑M1/1‑31 (MQ=255)
                                                                                                                       gCCTCTTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggc                                                                                                         <  2:399152‑M1/76‑46 (MQ=255)
                                                                                                                       gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACgctgtgggagcgggcgtgcccgcgaag                                                                                             <  1:504766‑M2/88‑28 (MQ=255)
                                                                                                                       gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACgctgtgggagcgggcgtgcccgcgaag                                                                                             >  2:504766‑M2/1‑61 (MQ=255)
                                                                                                                       GCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGGCGGCTGTGGCGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTgg                                                       <  1:445676‑M1/126‑1 (MQ=255)
                                                                                                                       GCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGCGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTgg                                                       >  2:445676‑M1/1‑126 (MQ=255)
                                                                                                                         ctctTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaa                             >  2:1330006‑M1/1‑29 (MQ=255)
                                                                                                                          tctTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaaccca                                                                         >  2:422834‑M1/1‑28 (MQ=255)
                                                                                                                          tctTCGCGGGCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaaccca                                                                         <  1:422834‑M1/105‑78 (MQ=255)
                                                                                                                          TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGTGACCGCATCTGCAACTGCa                            <  1:511365‑M1/150‑1 (MQ=255)
                                                                                                                           ctTCGCGGGCACGCCCGCTCCCACAGCgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggc                                                                                         <  1:504766‑M1/88‑62 (MQ=255)
                                                                                                                           ctTCGCGGGCACGCCCGCTCCCACAGCgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggc                                                                                         >  2:504766‑M1/1‑27 (MQ=255)
                                                                                                                            TTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTATGTGGGTAAATGCGACCGCATCTGCAACTGCATc                          <  2:1569906‑M1/150‑1 (MQ=255)
                                                                                                                                cgGGCACGCCCGCTCCCACAGGgtcacgacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccacca                      >  1:631692‑M1/1‑22 (MQ=255)
                                                                                                                                CGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCaa                                 <  2:551535‑M1/139‑1 (MQ=255)
                                                                                                                                CGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCaa                                 >  1:551535‑M1/1‑139 (MQ=255)
                                                                                                                                 gggCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccac                     >  2:150635‑M1/1‑21 (MQ=255)
                                                                                                                                 GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCATGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAGCCGACGGCATCTGCAACTGCATCAACGc                     <  2:154337‑M1/150‑1 (MQ=255)
                                                                                                                                  ggCACGCCCGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccaca                    <  1:1330006‑M1/150‑131 (MQ=255)
                                                                                                                                   GCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAGGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGTTAAATGCGACCGCATCTGCAACTGCATCAACGCCg                   <  2:722769‑M1/150‑1 (MQ=255)
                                                                                                                                   GCACACCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGCAGCGGCCGGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAAcgcag                   <  1:1341454‑M1/150‑3 (MQ=255)
                                                                                                                                       gCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcgg               <  1:523080‑M2/150‑106 (MQ=255)
                                                                                                                                       gCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggc                                                                                         >  1:399152‑M2/1‑45 (MQ=255)
                                                                                                                                       gCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggc                                                                                         <  2:399152‑M2/76‑32 (MQ=255)
                                                                                                                                       GCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAt                                                 <  1:570058‑M1/116‑1 (MQ=255)
                                                                                                                                       GCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAt                                                 >  2:570058‑M1/1‑116 (MQ=255)
                                                                                                                                       GCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTc               <  2:1615842‑M1/150‑1 (MQ=255)
                                                                                                                                        cccGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcggc              >  2:559971‑M1/1‑14 (MQ=255)
                                                                                                                                         ccGCTCCCACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcggca             >  1:1617601‑M1/1‑13 (MQ=255)
                                                                                                                                           gCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaa                                                        >  1:1195946‑M2/1‑41 (MQ=255)
                                                                                                                                           gCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaa                                                        <  2:1195946‑M2/105‑65 (MQ=255)
                                                                                                                                             tCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcggcaagac         >  2:523080‑M2/1‑39 (MQ=255)
                                                                                                                                              cccACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatcca                                                                  >  2:1340227‑M1/1‑8 (MQ=255)
                                                                                                                                              cccACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatcca                                                                  <  1:1340227‑M1/92‑85 (MQ=255)
                                                                                                                                               ccACAGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcggcaagacct       >  2:1255063‑M1/1‑7 (MQ=255)
                                                                                                                                               ccACAGGTACTGTGCAGCGCGTGACGGCTGTGGTGACcctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcggcaagacct       <  2:402064‑M2/150‑114 (MQ=255)
                                                                                                                                               CCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAt                                                 <  1:131122‑M1/108‑1 (MQ=255)
                                                                                                                                               CCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAt                                                 >  2:131122‑M1/1‑108 (MQ=255)
                                                                                                                                               CCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGcc       <  1:1261158‑M1/150‑1 (MQ=255)
                                                                                                                                                 acaGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccacca                      >  1:684618‑M1/1‑5 (MQ=255)
                                                                                                                                                 acaGGgtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccacca                      <  2:684618‑M1/133‑129 (MQ=255)
                                                                                                                                                    gggtcaccaccgccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccagcccaggcaacccagaatccagggaaacaaaacaatgcccaccgacaacacaacagaacccaccacagtcggcaagacctgcttc  <  2:396262‑M1/150‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGT  >  NC_002947/1419435‑1419732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.