New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1838122	72 (1.200)	5 (0.090)	4/220	NT	6.5%	intergenic (+27/+77)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	= 1838184	79 (1.440)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein

CAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAAC  >  NC_002947/1837976‑1838271                                                                                                                                                   |                                                                                                                                                      cagcCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGc                                                                                                                                                    <  2:412426/150‑1 (MQ=255)   gcCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCGACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGccc                                                                                                                                                  >  1:1387282/1‑150 (MQ=255)                    aCCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATcgc                                                                                                                                 >  2:1029236/1‑150 (MQ=255)                      cTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATcgcac                                                                                                                               >  2:906658/1‑150 (MQ=255)                           tctGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATcgcaccgcac                                                                                                                          >  1:1466338/1‑150 (MQ=255)                               gTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTaa                                                                                                                      <  2:232368/150‑1 (MQ=255)                               gTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTaa                                                                                                                      >  2:1430817/1‑150 (MQ=255)                                  cagcagGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTTTGCCAGTTGTCGGTGATGCTGGCGGTCACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGc                                                                                                                   <  1:1014022/150‑1 (MQ=255)                                  cagcagGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTaa                                                                                                                                     >  2:722843/1‑132 (MQ=255)                                  cagcagGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTaa                                                                                                                                     <  1:722843/132‑1 (MQ=255)                                    gcagGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCTTCAGTAATCGCACCGCACTTAAGGCCt                                                                                                                 <  1:35540/150‑1 (MQ=255)                                      agGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCtgt                                                                                                               <  2:1022967/150‑1 (MQ=255)                                        gCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGc                                                                                                             <  1:994489/150‑1 (MQ=255)                                          gTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCca                                                                                                                                           >  2:1039974/1‑118 (MQ=255)                                          gTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCca                                                                                                                                           <  1:1039974/118‑1 (MQ=255)                                           ttCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGt                                                                                                          >  1:242942/1‑150 (MQ=255)                                             cAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTAc                                                                                                        <  2:1431572/150‑1 (MQ=255)                                             cAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTAc                                                                                                        <  1:1219160/150‑1 (MQ=255)                                              aaCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattac                                                                                                       >  2:728157‑M1/1‑102 (MQ=255)                                              aaCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCa                                                                                                            >  2:139678/1‑145 (MQ=255)                                              aaCCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCa                                                                                                            <  1:139678/145‑1 (MQ=255)                                                 ccggtgCATGCAGAGCGCGGGCGGCCGCTTTGCCAGTTGTCGGTGATGCTGGGGCACACCGTCAACTATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCtgt                                                                                                    <  2:204074/145‑1 (MQ=255)                                                  agcctggggctgttcattgccgggctactgtacgtgcgctggaagttccagcatgggcggcgcatggcgggcgaaggcagttagatttTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCtgtg                                                                                                   >  2:805578‑M1/89‑150 (MQ=255)                                                     ggCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtggga                                                                                                <  2:1059799‑M1/150‑56 (MQ=255)                                                      gCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCAGTGGGAg                                                                                               >  2:255692/1‑150 (MQ=255)                                                        aTGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCg                                                                                             >  2:1450507/1‑150 (MQ=255)                                                             gagagCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGt                                                                                        >  2:242942‑M2/1‑149 (MQ=255)                                                                           gCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtgggagcgggcatgcccgcgaatggga                                                                          <  1:728157‑M1/150‑78 (MQ=255)                                                                             tgtgCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTa                                                                        >  2:1516294/1‑150 (MQ=255)                                                                              gtgCTAGTTGTGGGTGATGCTGGCGCACACCGGCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTaa                                                                       <  2:462774/150‑1 (MQ=255)                                                                              gtgCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGTCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGaaaa                                                                             >  1:308058/1‑144 (MQ=255)                                                                              gtgCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGaaaa                                                                             <  2:308058/144‑1 (MQ=255)                                                                               tgCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCAACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAAc                                                                      >  1:360163/1‑150 (MQ=255)                                                                                gCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACt                                                                     <  1:853986/150‑1 (MQ=255)                                                                                  tggTTGACGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACt                                                                     <  2:139148/146‑1 (MQ=255)                                                                                  tggTTGACGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACt                                                                     >  1:139148/3‑148 (MQ=255)                                                                                    gTTGTCGGTGATGCTGGCGCACACCATGGACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTACCt                                                                 >  1:457497/1‑150 (MQ=255)                                                                                        tCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGaaaaa                                                                            <  2:1616858/135‑1 (MQ=255)                                                                                        tCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGaaaaa                                                                            >  1:1616858/1‑135 (MQ=255)                                                                                          ggTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTaa                                                                       <  2:879758/138‑1 (MQ=255)                                                                                          ggTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTaa                                                                       >  1:879758/1‑138 (MQ=255)                                                                                          ggTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgccc                                                           <  1:906658/150‑1 (MQ=255)                                                                                            tGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCACCCATTCGCGGGCATGCCCGCTCCCACAGTACTAGCATCGCGTTTAATGTCTTTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgcccgc                                                         >  1:1191919/1‑150 (MQ=38)                                                                                                gCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGtgc                                                                                      >  1:1641129‑M2/1‑114 (MQ=255)                                                                                                gCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGtgc                                                                                      <  2:1641129‑M2/117‑4 (MQ=255)                                                                                                 cTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgc                                                    <  1:1430817/150‑1 (MQ=255)                                                                                                  tGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgcg                                                   >  2:1287587/1‑150 (MQ=255)                                                                                                   tgcgcACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgcgc                                                  >  1:1197341/2‑150 (MQ=255)                                                                                                   cagcatcacCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGACATGCCCGCTCCCACAGTAATCTCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgcgc                                                  >  2:614867/7‑150 (MQ=255)                                                                                                   agcatgagcggcgcatggcgggcgaaggcagttagatttTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTgg                                                                                                  >  2:500880‑M1/40‑102 (MQ=255)                                                                                                   agcatgagcggcgcatggcgggcgaaggcagttagatttTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTgg                                                                                                  <  1:500880‑M1/63‑1 (MQ=255)                                                                                                        acacCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTc                                             >  1:1172465/1‑150 (MQ=255)                                                                                                         cacCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGACATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGACCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCa                                            >  2:572839/1‑150 (MQ=255)                                                                                                          acCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCAt                                           >  1:1306024/1‑150 (MQ=255)                                                                                                              tCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTg                                       <  1:473403/150‑1 (MQ=255)                                                                                                                aaCCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtggga                                                                                                >  1:1502144‑M1/1‑36 (MQ=255)                                                                                                                aaCCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtggga                                                                                                <  2:1502144‑M1/91‑56 (MQ=255)                                                                                                                  ccATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTCGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAAc                                   >  1:187917/1‑150 (MQ=255)                                                                                                                       gAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCGAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCa                              <  2:1191919/150‑1 (MQ=255)                                                                                                                        aGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAg                             >  2:938795/1‑150 (MQ=255)                                                                                                                        aGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCAGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAg                             <  1:255692/150‑1 (MQ=255)                                                                                                                         gCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAgc                            <  1:1287587/150‑1 (MQ=255)                                                                                                                          ccTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAgcg                           >  2:1031915/1‑150 (MQ=255)                                                                                                                           cTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgc                                                    >  1:961739/1‑124 (MQ=255)                                                                                                                           cTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATgc                                                    <  2:961739/124‑1 (MQ=255)                                                                                                                           cTTGTGTTGCTCCCATTCGCGGGCATGCCCGATCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTTGCTGTGGGAGCGACCGTTCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGCAACTTCCAgcgc                          >  1:529690/1‑150 (MQ=255)                                                                                                                           cTTGTGTTGCTCCCATTCGCGGGCATGCCAGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGa                                     >  1:278661/1‑139 (MQ=255)                                                                                                                           cTTGTGTTGCTCCCATTCGCGGGCATGCCAGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGa                                     <  2:278661/139‑1 (MQ=255)                                                                                                                               tgtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGt                      >  1:1539169/1‑150 (MQ=255)                                                                                                                               tgtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGt                      >  2:1085678/1‑150 (MQ=255)                                                                                                                                gtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCTAGCGCACGTa                     <  2:1197341/150‑1 (MQ=255)                                                                                                                                gtTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTa                     >  2:481287/1‑150 (MQ=255)                                                                                                                                    cTCCCACTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGt                 <  1:1088894/150‑1 (MQ=255)                                                                                                                                     tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGtgcccgcgaatgggagcaacacaaggctcaatggttgacggtgtgcgccagcatcaccgacaactggcacagc                <  1:728157‑M2/150‑74 (MQ=255)                                                                                                                                     tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgcc                                                            >  1:942108/1‑106 (MQ=255)                                                                                                                                     tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTcgcc                                                            <  2:942108/106‑1 (MQ=255)                                                                                                                                     tCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTa                >  2:1280556/1‑150 (MQ=255)                                                                                                                                       ccATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTgg                                                                                                  <  1:1217381/66‑1 (MQ=255)                                                                                                                                       ccATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTgg                                                                                                  >  2:1217381/1‑66 (MQ=255)                                                                                                                                       ccATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGaaaaa                                                                            <  2:58421/88‑1 (MQ=255)                                                                                                                                       ccATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGaaaaa                                                                            >  1:58421/1‑88 (MQ=255)                                                                                                                                       ccATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCACTCATGCTGGAACTTCCAGCGCACGTACAGTAGc              >  2:443/1‑150 (MQ=255)                                                                                                                                         aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTc                                <  1:92063/130‑1 (MQ=255)                                                                                                                                         aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTc                                >  2:92063/1‑130 (MQ=255)                                                                                                                                         aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGccc            >  2:1024073/1‑150 (MQ=255)                                                                                                                                         aTTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGccc            >  1:546991/1‑150 (MQ=255)                                                                                                                                          TTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCg           >  2:1466338‑M1/1‑150 (MQ=255)                                                                                                                                             GCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTc                                                               >  2:257607‑M1/1‑95 (MQ=255)                                                                                                                                             GCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTc                                                               <  1:257607‑M1/95‑1 (MQ=255)                                                                                                                                              CGGGCATGCTCAACCCCACGGTAAACGGTCCGCACGTAATGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCaa       >  2:1172465‑M1/1‑150 (MQ=255)                                                                                                                                              CGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGTCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCaa       >  1:496709‑M1/1‑150 (MQ=255)                                                                                                                                               GGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAAt      >  1:1029236‑M1/1‑150 (MQ=255)                                                                                                                                                 gCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtgggagcgggcatgcccgcgaatgggagcaacacaaggctcaatggttgacggtgtgcgccagc                                     <  2:1641129‑M1/117‑115 (MQ=255)                                                                                                                                                 gCAcgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtgggagcgggcatgcccgcgaatgggagcaacacaaggctcaatggttgacggtgtgcgccagc                                     >  1:1641129‑M1/1‑3 (MQ=255)                                                                                                                                                  CATGCCCGCTCCCCCAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGCGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGaa   >  2:1387282‑M1/1‑150 (MQ=255)                                                                                                                                                   acgcccgctcccacaggtactgcacaggccttaagtgcggtgcgattactgtgggagcgggcatgcccgcgaatgggagcaacacaaggctcaatggttgacggtgtgcgccagcatcaccgacaactggcacagcggccgcccgctctc  >  2:242942‑M1/1‑1 (MQ=255)                                                                                                                                                   ATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAAc  >  1:1085678‑M1/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                      CAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCATGCCCGCTCCCACAGTAATCGCACCGCACTTAAGGCCTGTGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAAATCTAACTGCCTTCGCCCGCCATGCGCCGCTCATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAAC  >  NC_002947/1837976‑1838271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.