BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1976257 =	82 (1.370)	7 (0.130)	7/212	NT	8.9%	intergenic (+42/‑123)	pheA/PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
*	?	NC_002947	1976305 =	70 (1.320)	7 (0.130)	7/212	NT	8.9%	intergenic (+90/‑75)	pheA/PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase

Only 100 of 108 total aligned reads displayed.

TTCGTCGGCCACCACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCC  >  NC_002947/1976108‑1976406

ttCGTCGGCCACCACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATg                                                                                                                                                       >  1:923212/1‑150 (MQ=255)

      aggcctagaccgaccacgaccaggcggtcgatgatgggcgcgggtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCt                                                                                                                                                 <  2:795798‑M1/7‑1 (MQ=255)

       gCCACCACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGTGGGCATGCCCGCTc                                                                                                                                                >  1:1609919/1‑150 (MQ=255)

       gCCACCACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTc                                                                                                                                                <  1:1095090/150‑1 (MQ=255)

       gCCACCACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTc                                                                                                                                                >  1:1520568/1‑150 (MQ=255)

        gcctagaccgaccacgaccaggcggtcgatgatgggcgcgggtttggtttttgctgcatttacctctggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTcc                                                                                                                                               >  2:463622‑M1/142‑150 (MQ=255)

          ctagaccgaccacgaccaggcggtcgatgatgggcgcgggtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctagcccgcgaagg                                                                                                                                             >  2:1184051‑M1/140‑145 (MQ=255)

           tagaccgaccacgaccaggcggtcgatgatgggcgcgggtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctagcccgcgaaggg                                                                                                                                            >  1:389236‑M1/139‑144 (MQ=255)

           tagaccgaccacgaccaggcggtcgatgatgggcgcgggtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTCCcac                                                                                                                                            <  1:1128802‑M1/12‑1 (MQ=255)

            caccGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGTATTCCCGCTTCcaca                                                                                                                                           >  2:669290/1‑150 (MQ=255)

            caccGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                                           >  1:1567065/1‑150 (MQ=255)

             gaccgaccacgaccaggcggtcgatgatgggcgcgggtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTCCCACAg                                                                                                                                          <  2:1259911‑M1/14‑1 (MQ=255)

                gcgACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGa                                                                                                                                       <  1:438036/150‑1 (MQ=255)

                    cccGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGGCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGt                                                                                                                                         >  1:1571494/1‑144 (MQ=255)

                    cccGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCTCTCCCACAGt                                                                                                                                         <  2:1571494/144‑1 (MQ=255)

                     ccGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCTCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGTCTGCCATGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCAtg                                                                                                                                  >  2:1118801/1‑150 (MQ=255)

                      cGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCAtgt                                                                                                                                 >  1:32247/1‑150 (MQ=255)

                      cGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGATTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCAtgt                                                                                                                                 >  1:880726/1‑150 (MQ=255)

                       gCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCAGGAATGCCCGCTCCCACAGTAAGCAtgtt                                                                                                                                >  2:40387/1‑149 (MQ=255)

                         tGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGAt                                                                                                                              <  2:1520568/150‑1 (MQ=255)

                          gATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATg                                                                                                                             <  1:188662/150‑1 (MQ=255)

                                     tGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCtgt                                                                                                                  <  1:669290/150‑1 (MQ=255)

                                     tGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCtgt                                                                                                                  <  2:1244680/150‑1 (MQ=255)

                                      gCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCtgtg                                                                                                                 <  2:443563/150‑1 (MQ=255)

                                      gCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCtgtg                                                                                                                 <  1:710256/150‑1 (MQ=255)

                                        tCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTggg                                                                                                               >  1:183072/1‑150 (MQ=255)

                                              aGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCggg                                                                                                         <  1:1381429/150‑1 (MQ=255)

                                                 tCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTa                                                                                                      >  1:404269/1‑150 (MQ=255)

                                                 gtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGc                                                                                                                                                      <  2:349559‑M1/2‑1 (MQ=255)

                                                 gtttggtttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGc                                                                                                                                                      >  1:349559‑M1/101‑102 (MQ=255)

                                                   aGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCgg                                                                                                          >  1:761235/1‑144 (MQ=255)

                                                   aGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCgg                                                                                                          <  2:761235/144‑1 (MQ=255)

                                                       tttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcagcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCcgc                                                                                                <  1:75121‑M1/56‑1 (MQ=255)

                                                         gaggCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATg                                                                                                                                                       <  2:1592072/93‑1 (MQ=255)

                                                         gaggCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATg                                                                                                                                                       >  1:1592072/1‑93 (MQ=255)

                                                          ttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcagcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGaa                                                                                             >  2:75121‑M1/92‑150 (MQ=255)

                                                           ggCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAg                                                                                            <  2:1567065/150‑1 (MQ=255)

                                                              tgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctag                                                                                                                                                       <  2:1416235‑M1/1‑1 (MQ=255)

                                                              tgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctag                                                                                                                                                       >  1:1416235‑M1/88‑88 (MQ=255)

                                                               gtgGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGgcc                                                                                        >  1:376933/1‑150 (MQ=255)

                                                                tgGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCGGCTCCcaca                                                                                                                                           >  2:49899/1‑98 (MQ=255)

                                                                tgGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                                           <  1:49899/98‑1 (MQ=255)

                                                                          ggTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGcc                                                                             >  2:647451/1‑150 (MQ=255)

                                                                           gTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGTGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccc                                                                            <  2:145280/150‑1 (MQ=255)

                                                                           gTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCGTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGccc                                                                            >  2:1191121/1‑150 (MQ=255)

                                                                             gCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTGGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccctt                                                                          <  1:254772/150‑3 (MQ=255)

                                                                                gggCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATg                                                                       <  1:1037415/150‑1 (MQ=255)

                                                                                gggCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCCGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATg                                                                       <  1:928643/150‑1 (MQ=255)

                                                                                  gCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGc                                                                     <  2:771112/150‑1 (MQ=255)

                                                                                    tctTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGc                                                                                                        <  1:585796/113‑1 (MQ=255)

                                                                                    tctTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGc                                                                                                        >  2:585796/1‑113 (MQ=255)

                                                                                     ctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAgg                                                                                           >  2:923268‑M1/65‑125 (MQ=255)

                                                                                     ctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAgg                                                                                           <  1:923268‑M1/61‑1 (MQ=255)

                                                                                      tgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTCCca                                                                                                                                             >  2:40306‑M1/64‑74 (MQ=255)

                                                                                      tgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTCCca                                                                                                                                             <  1:40306‑M1/11‑1 (MQ=255)

                                                                                       tATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTca                                                                >  1:1541509/1‑150 (MQ=255)

                                                                                        aTCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcac                                                               >  2:1539855/1‑150 (MQ=255)

                                                                                        aTCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcac                                                               >  2:1539266/1‑150 (MQ=255)

                                                                                        aTCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGCGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcac                                                               <  1:1039876/150‑1 (MQ=255)

                                                                                         tCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAg                                                                                            <  1:374772/120‑1 (MQ=255)

                                                                                         tCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAg                                                                                            >  2:374772/1‑120 (MQ=255)

                                                                                          ccGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAg                                                             <  1:582414/150‑1 (MQ=255)

                                                                                            gAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccc                                                                            >  2:196824/1‑133 (MQ=255)

                                                                                            gAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccc                                                                            <  1:196824/133‑1 (MQ=255)

                                                                                                  taggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTa                                                                                                      >  1:627666‑M1/52‑101 (MQ=255)

                                                                                                  ggTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGcc                                                                    >  2:140473/1‑135 (MQ=255)

                                                                                                  ggTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGcc                                                                    <  1:140473/135‑1 (MQ=255)

                                                                                                    tGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGa                                                   >  1:1422027/1‑150 (MQ=255)

                                                                                                     gCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGAt                                                  <  2:376933/150‑1 (MQ=255)

                                                                                                       tttGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCtggctga                                                <  2:404269/150‑7 (MQ=255)

                                                                                                        ttGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTc                                               >  1:1407519/1‑150 (MQ=255)

                                                                                                          gATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTg                                             >  1:1617185/1‑150 (MQ=255)

                                                                                                          gATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGAGTTCTg                                             >  1:1259911/1‑150 (MQ=255)

                                                                                                           aTTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGgc                                                                                         <  2:61109/105‑1 (MQ=255)

                                                                                                           aTTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGgc                                                                                         >  1:61109/1‑105 (MQ=255)

                                                                                                           aTTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGa                                            >  2:720064/1‑150 (MQ=255)

                                                                                                            ttCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTTTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTATATTTCTGat                                           <  2:628061/150‑2 (MQ=255)

                                                                                                               aGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAg                                        >  1:319149/1‑150 (MQ=255)

                                                                                                               aGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAg                                        <  1:647451/150‑1 (MQ=255)

                                                                                                                ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCggg                                                                                                         <  2:1111284/84‑1 (MQ=255)

                                                                                                                ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCggg                                                                                                         >  1:1111284/1‑84 (MQ=255)

                                                                                                                ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcaca                                                              <  2:162956/127‑1 (MQ=255)

                                                                                                                ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAgg                                       <  2:1044176/150‑1 (MQ=255)

                                                                                                                ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCCGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcacc                                                              >  1:162956/1‑126 (MQ=255)

                                                                                                                     cTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCg                                  <  2:807102/150‑1 (MQ=255)

                                                                                                                        ggggCTACCTTGCAGCCCTTCGCGGGCATGCCCGCTCGCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCAc                               >  2:643772/1‑150 (MQ=255)

                                                                                                                           gCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAg                            >  2:1310566/1‑150 (MQ=255)

                                                                                                                                cTTGCAGCCCTTCGCGGGCATGCCCTCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGaa                                           >  2:369356/1‑130 (MQ=255)

                                                                                                                                cTTGCAGCCCTTCGCGGGCATGCCCTCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGaa                                           <  1:369356/130‑1 (MQ=255)

                                                                                                                                  tGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTATATTTCTGAACAGGGTTCGCACCAGTGGTaaa                     <  1:1118801/150‑1 (MQ=255)

                                                                                                                                   gCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAAt                    <  1:525898/150‑1 (MQ=255)

                                                                                                                                   gCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAAt                    <  1:720064/150‑1 (MQ=255)

                                                                                                                                      gCCCTTTGCGGGCATTCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATgca                 <  1:685319/150‑1 (MQ=255)

                                                                                                                                         cTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGCTCTGTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCCTTGGTAGATgctgta              >  2:422164/1‑146 (MQ=255)

                                                                                                                                          ttCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCaa             >  1:318561/1‑150 (MQ=255)

                                                                                                                                             gcgGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCaaaaa          >  1:577753/1‑150 (MQ=255)

                                                                                                                                                 gCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAaaaccaa      >  2:776403/1‑150 (MQ=255)

                                                                                                                                                     GCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcaca                                                              <  1:1194908‑M1/90‑1 (MQ=255)

                                                                                                                                                     GCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcaca                                                              >  2:1194908‑M1/1‑90 (MQ=255)

                                                                                                                                                     GCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAAccc  <  1:886792‑M1/150‑1 (MQ=255)

TTCGTCGGCCACCACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCC  >  NC_002947/1976108‑1976406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.