New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2273924 =	48 (0.800)	6 (0.100)	6/232	NT	11.0%	coding (486/1041 nt)	PP_2004	AraC family transcriptional regulator
	?	NC_002947	2273958 =	51 (0.880)					coding (452/1041 nt)	PP_2004	AraC family transcriptional regulator

CCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCGCGGTAGTTGGCCGC  >  NC_002947/2273779‑2274073                                                                                                                                                   |                                                                                                                                                          cgtaccctgctgcgtttcgagccgctttacgcggccaactaccgcggccattcccgctttgaggaagatgcccagggcgcctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGcc                                                                                                                                                        >  2:855718‑M1/147‑150 (MQ=255)  cAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑Ag                                                                                                                                                  <  2:1394582/150‑1 (MQ=255)   aGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGc                                                                                                                                                 <  2:828089/150‑1 (MQ=255)      tGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCg                                                                                                                                              >  2:122963/1‑150 (MQ=255)         aaGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGcc                                                                                                                                           >  1:716590/1‑150 (MQ=255)            gTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAAc                                                                                                                                        <  2:716590/150‑1 (MQ=255)               gcgcGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAAATAGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTgg                                                                                                                                     >  1:616324/1‑150 (MQ=255)                   gagccgctttacgcggccaactaccgcggccattcccgctttgaggaagatgcccagggcgcctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGCC‑‑‑‑AGCTCGGCCAACTGGgcc                                                                                                                                  <  1:331030‑M1/22‑1 (MQ=255)                        gctttacgcggccaactaccgcggccattcccgctttgaggaagatgcccagggcgcctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGCCGGCCAGCTCGGCCAACTGGgcca                                                                                                                                 <  2:583250‑M1/27‑1 (MQ=255)                           cGCAGCTGAATGCCTTCTGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCGTAGGGGGGCGCAACCAACTCGATCTCCAGGCGTTCG‑GCCTGCATCCGGGCGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCg                                                                                                                         <  1:935124/150‑1 (MQ=255)                             cAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGc                                                                                                                       >  2:1040234/1‑150 (MQ=255)                                cggccaactaccgcggccattcccgctttgaggaagatgcccagggcgcctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCg                                                                                                                         >  1:583250‑M1/116‑150 (MQ=255)                                   aTTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCcagcag                                                                                                                 >  1:1173458/1‑150 (MQ=255)                                     aactaccgcggccattcccgctttgaggaagatgcccagggcgcctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGt                                                                                                                >  2:331030‑M1/111‑150 (MQ=255)                                          tCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGc                                                                                                                                                         >  1:207935/1‑107 (MQ=255)                                          tCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGc                                                                                                                                                         <  2:207935/107‑1 (MQ=255)                                          tCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑a                                                                                                                                                   <  1:453753/109‑1 (MQ=255)                                          tCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑a                                                                                                                                                   >  2:453753/1‑109 (MQ=255)                                             gcggcgAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGAcc                                                                                                       >  1:1484813/1‑150 (MQ=255)                                                  gAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACaaa                                                                                                  >  2:1553677/1‑150 (MQ=255)                                                  gAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACaaa                                                                                                  >  1:746027/1‑150 (MQ=255)                                                       gCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGt                                                                                             >  2:813250/1‑150 (MQ=255)                                                        cacaGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGtt                                                                                            <  2:127124/150‑1 (MQ=255)                                                                tgctgcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGt                                                                                    <  1:398512/150‑1 (MQ=255)                                                                tgctgcAAAGCCTTTGATAGCTCGCGGCATAGGAGGGCGCGGCAAACTCGAT‑TTCTCGCGCAAGCACATACACCGGCCTGCCGGCC‑‑‑‑ACCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGt                                                                                    <  1:529843/150‑1 (MQ=255)                                                                    gcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCGGCACCCCGGTGCAGGcc                                                                                                                                                        >  1:1179979/1‑82 (MQ=38)                                                                    gcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCGGCACCCCGGTGCAGGcc                                                                                                                                                        <  2:1179979/82‑1 (MQ=38)                                                                      aaaGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAgg                                                                              >  2:1567554/1‑150 (MQ=255)                                                                        aGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAgggg                                                                            >  1:650406/1‑150 (MQ=255)                                                                          cGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGgc                                                                                                                                   >  1:1109812/1‑93 (MQ=255)                                                                          cGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGgc                                                                                                                                   <  2:1109812/93‑1 (MQ=255)                                                                              tGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGGACCGGGGTGCCGCAT‑‑‑‑AGCTTTGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATg                                                                      <  2:387647/150‑1 (MQ=255)                                                                                 tAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGGCGTTGTAGGGGCTGATGGaa                                                                   >  1:144338/1‑150 (MQ=255)                                                                                 ctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGCC‑‑‑‑AGCTCGGCCAACTGGGCCGGCCAGCCGGCcagcag                                                                                                                 <  1:811838‑M1/39‑1 (MQ=255)                                                                                 ctggctgcgcttctattccatcagcccctacaacgactacaaccgctttgtggtcgactcactgctGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCcagcag                                                                                                                 >  2:811838‑M1/67‑105 (MQ=255)                                                                                  aGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAAt                                                                  >  2:1634071/1‑150 (MQ=255)                                                                                  aGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAAt                                                                  >  1:1599508/1‑150 (MQ=255)                                                                                      cgcgGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGaa                                                              <  1:1498902/150‑1 (MQ=255)                                                                                       gcgGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAg                                                             <  1:813250/150‑1 (MQ=255)                                                                                           cATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGGCGTTGTAGGGGCTGATGGAATAGAAGCGCa                                                         <  2:746027/150‑1 (MQ=255)                                                                                                   ggCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGgcg                                                 >  2:1026893/1‑150 (MQ=255)                                                                                                        ggCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGt                                                                                                                <  2:648705/82‑1 (MQ=255)                                                                                                        ggCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGt                                                                                                                >  1:648705/1‑82 (MQ=255)                                                                                                           aaaCTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGc                                         <  2:1311964/150‑1 (MQ=255)                                                                                                              cTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGGCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATc                                      <  2:1173458/150‑1 (MQ=255)                                                                                                              cTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATc                                      >  1:1167440/1‑150 (MQ=255)                                                                                                               tCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTGGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCt                                     >  2:1594574/1‑150 (MQ=255)                                                                                                                cGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGaa                                                              <  1:760964/124‑1 (MQ=255)                                                                                                                cGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGaa                                                              >  2:760964/1‑124 (MQ=255)                                                                                                                 gATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTc                                   >  1:500619/1‑150 (MQ=255)                                                                                                                   tctcCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCt                                 <  2:500619/150‑1 (MQ=255)                                                                                                                      ccAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCaa                              >  1:1313821/1‑150 (MQ=255)                                                                                                                         ggagTTCG‑GCCTGCACCGGGGTTCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGc                           >  1:1645698/4‑150 (MQ=255)                                                                                                                           cGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCgg                         <  1:600357/150‑1 (MQ=255)                                                                                                                             ttCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGa                       <  2:1167440/150‑1 (MQ=255)                                                                                                                               cG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGTCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAAt                     <  2:815976/150‑1 (MQ=255)                                                                                                                                g‑gCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATg                    <  1:122963/150‑1 (MQ=255)                                                                                                                                  gCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATgg                   >  2:320059/1‑150 (MQ=255)                                                                                                                                        aCCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCGCgg             <  2:1599508/150‑1 (MQ=255)                                                                                                                                          cGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAg                                                                                                 <  1:649168/64‑1 (MQ=255)                                                                                                                                          cGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAg                                                                                                 >  2:649168/1‑64 (MQ=255)                                                                                                                                                 ccGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCGCGGTAGTTGGcc    >  2:144183/1‑150 (MQ=255)                                                                                                                                                   GGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCGCGGTAGTTGGCcgc  >  1:930582‑M1/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                          CCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCG‑GCCTGCACCGGGGTGCCGGCC‑‑‑‑AGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCGCGGTAGTTGGCCGC  >  NC_002947/2273779‑2274073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.