New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2422987 =	36 (0.600)	4 (0.070)	4/230	NT	9.4%	coding (1232/1248 nt)	PP_2124	glycosyl transferase
	?	NC_002947	2423036 =	43 (0.750)					coding (1183/1248 nt)	PP_2124	glycosyl transferase

ATCTACAAGAACCAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGC  >  NC_002947/2422848‑2423134                                                                                                                                            |                                                                                                                                                    aTCTACAAGAACCAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGc                                                                                                                                           >  1:884338/1‑150 (MQ=255)    tACAAGAACCAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACt                                                                                                                                        >  1:834793/1‑150 (MQ=255)     aCAAGAAACAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTg                                                                                                                                       <  2:96405/150‑1 (MQ=255)       aaGAACCAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGc                                                                                                                                     <  1:1346401/150‑1 (MQ=255)            ccAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAggc                                                                                                                                >  2:1325730/1‑148 (MQ=255)               gagCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAgcggcg                                                                                                                             >  2:835025/1‑150 (MQ=255)                  cTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAgcggcgcgg                                                                                                                          >  1:163084/1‑150 (MQ=255)                           gctgcGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCg                                                                                                                 <  2:163084/150‑1 (MQ=255)                              gcgcagcgcaGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTg                                                                                                              <  1:1112682/150‑1 (MQ=255)                                       agcCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTggg                                                                                                     >  1:905660/1‑150 (MQ=255)                                               cGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGt                                                                                             >  2:282663/1‑150 (MQ=255)                                                ccagttgagcgatgccgggcgccagtttgcccgccagcgccacgactggagcgtggctgcccaacaactggagaatgtgcacatacgcctgaCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAgg                                                                                                >  2:1255049‑M1/93‑146 (MQ=255)                                                ccagttgagcgatgccgggcgccagtttgcccgccagcgccacgactggagcgtggctgcccaacaactggagaatgtgcacatacgcctgaCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAgg                                                                                                <  1:1255049‑M1/54‑1 (MQ=255)                                                 gAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAt                                                                                           <  1:835025/150‑1 (MQ=255)                                                   gggCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCAAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAtgt                                                                                         <  1:282663/150‑1 (MQ=255)                                                      ccTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGca                                                                                      >  2:1190177/1‑150 (MQ=255)                                                             gAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGACTGGGTCAGGCGTATGTGCACATtctc                                                                               <  2:110941/150‑1 (MQ=255)                                                                            agcaCGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGc                                                                                                                                     >  2:1141048/1‑81 (MQ=255)                                                                            agcaCGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGc                                                                                                                                     <  1:1141048/81‑1 (MQ=255)                                                                              caCGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTCTGTGCACATTCTCCCGTTCTTGGGCAGCCa                                                              >  2:187601/1‑150 (MQ=255)                                                                                 gCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGc                                                           >  1:1246148/1‑150 (MQ=255)                                                                                   cGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTc                                                         >  2:1109709/1‑150 (MQ=255)                                                                                      aGCAGTGCGACATCGGGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCTTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCGCGCTCCAg                                                      <  1:187601/150‑1 (MQ=255)                                                                                         acgactggagcgtggctgcccaacaactggagaatgtgcacatacgcctgaCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCg                                                                                                                 >  2:1345983‑M1/52‑88 (MQ=255)                                                                                         acgactggagcgtggctgcccaacaactggagaatgtgcacatacgcctgaCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCg                                                                                                                 <  1:1345983‑M1/37‑1 (MQ=255)                                                                                           ggCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTg                                                 <  1:1190177/150‑1 (MQ=255)                                                                                                    gTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCg                                        >  1:345783/1‑150 (MQ=255)                                                                                                             aTCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTg                               >  1:1340188/1‑150 (MQ=255)                                                                                                              tCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTgg                              >  1:815092/1‑150 (MQ=255)                                                                                                              tCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTgg                              >  1:1241272/1‑150 (MQ=255)                                                                                                                  cTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAt                                                                                           >  1:905592/1‑85 (MQ=255)                                                                                                                  cTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAt                                                                                           <  2:905592/85‑1 (MQ=255)                                                                                                                          aGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCg                  >  2:163506/1‑150 (MQ=255)                                                                                                                                ttGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAAc            <  2:815092/150‑1 (MQ=255)                                                                                                                                ttGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAAc            >  2:1128832/1‑150 (MQ=255)                                                                                                                                ctGGCTGGGCCGCTCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCCTCGCTCacc            >  2:780480/2‑148 (MQ=255)                                                                                                                                     tGAGCGGCCCAGCCAGGCATTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCt       >  1:352480/1‑150 (MQ=255)                                                                                                                                     tGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAg                                                                            >  2:1479624/1‑81 (MQ=255)                                                                                                                                     tGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAg                                                                            <  1:1479624/81‑1 (MQ=255)                                                                                                                                     tGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCGGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCt       >  2:1098169/1‑150 (MQ=255)                                                                                                                                        gCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCAt    >  1:247099/1‑150 (MQ=255)                                                                                                                                          ggCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATgc  <  2:905660/150‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                    ATCTACAAGAACCAGAGCTCGGGTGTGCTGCGCAGCGCAGCCTGGGCGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGC  >  NC_002947/2422848‑2423134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.