New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3613318 =	75 (1.250)	4 (0.070)	4/226	NT	5.4%	coding (409/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	3613342 =	69 (1.220)					coding (385/3396 nt)	mcoA	Mn(II) copper oxidase A

GGTCGGGAACGGGTACAGGCCGGGTTGCTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGC  >  NC_002947/3613172‑3613461                                                                                                                                                   |                                                                                                                                                 cgtgtatggcgaccgcaacacagtccgcaccgacaacgtgctgccacctgccctgcaaacgtcggacaagtatcctaccaacggcaaacccagcccgttgttcggtgcgcaaccattcacccagcaactgttactgttcgaagaatTCgg                                                                                                                                               >  1:242424‑M1/147‑150 (MQ=255)  gtgtatggcgaccgcaacacagtccgcaccgacaacgtgctgccacctgccctgcaaacgtcggacaagtatcctaccaacggcaaacccagcccgttgttcggtgcgcaaccattcacccagcaactgttactgttcgaagaatTCggg                                                                                                                                              >  1:1418568‑M1/146‑150 (MQ=255)   tgtatggcgaccgcaacacagtccgcaccgacaacgtgctgccacctgccctgcaaacgtcgaacaagtatcctaccaacggcaaacccagcccgttgttcggtgcgcaaccattcccccagcaactgttactgttcgaagaatTCGGGt                                                                                                                                             >  2:33002‑M1/145‑150 (MQ=255)      ggAACGGGTACAGGCCGGGTTGGTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑Ga                                                                                                                                         <  2:1109382/150‑1 (MQ=255)             gTACAGGCCGGGTTGCTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTtctc                                                                                                                                  <  2:1087773/150‑1 (MQ=255)             gTACAGGCCGGGTTGCTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTtctc                                                                                                                                  <  2:940456/150‑1 (MQ=255)                 aGGCCGGGTTGCTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGAc                                                                                                                              <  1:1225576/150‑1 (MQ=255)                  ggCCGGGTTGCTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGAcc                                                                                                                             >  2:1035819/1‑150 (MQ=255)                            cTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAAttcttc                                                                                                                   <  2:1270148/150‑1 (MQ=255)                             ttGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTtctc                                                                                                                                  >  2:441527/1‑134 (MQ=255)                             ttGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTtctc                                                                                                                                  <  1:441527/134‑1 (MQ=255)                             ttGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCg                                                                                                                  >  1:734000/1‑150 (MQ=255)                             ttGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCg                                                                                                                  >  1:508798/1‑150 (MQ=255)                                 ggAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaaca                                                                                                              >  2:83189/1‑150 (MQ=255)                                  gAACGCTTCCAAAGCGCTGCCACTTGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacag                                                                                                             <  1:448544/150‑1 (MQ=255)                                  gAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacag                                                                                                             >  2:500859/1‑150 (MQ=255)                                  gAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaaca                                                                                                              <  1:162391/149‑1 (MQ=255)                                  gAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaaca                                                                                                              >  2:162391/1‑149 (MQ=255)                                  gAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGACACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacag                                                                                                             >  2:1644311/1‑150 (MQ=255)                                    aCGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacagta                                                                                                           >  2:384070/1‑150 (MQ=255)                                     cGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacagtaa                                                                                                          <  1:1035819/150‑1 (MQ=255)                                     cGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaaca                                                                                                              >  2:722401/1‑146 (MQ=255)                                     cGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaaca                                                                                                              <  1:722401/146‑1 (MQ=255)                                      gCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGCGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTGGaacagtaac                                                                                                         >  1:735638/1‑150 (MQ=255)                                      gCTTCCAAAGCGCTGCCACTGGGCCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGCTACCGGGAAGGTCAGATCGGCCACCGGCGTCGGCGGGTC‑GTGCTTCTCTTTCTCGAATTCTTCGgtcagtatc                                                                                                         <  2:17873/150‑3 (MQ=255)                                        ttCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGGCCCGAGTTCTTCGaacagcaaccg                                                                                                       >  2:379400/1‑148 (MQ=255)                                           cAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTg                                                                                                    >  2:967771/1‑150 (MQ=255)                                            aaaGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGc                                                                                                   >  1:474104/1‑150 (MQ=255)                                            aaaGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGAGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGCCACCGCCGTGGTCGGGTC‑GAGCTTCCATGACCCGAATTATTCGACCAGTAACCGCTGc                                                                                                   >  2:285695/1‑150 (MQ=255)                                               gcgcTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTgg                                                                                                <  1:1076254/150‑1 (MQ=255)                                                 gcTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGGCCCGAATTCTTCGAACAGTAACAGTTGCTGGGt                                                                                              <  2:1156285/150‑1 (MQ=255)                                                 gcTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGt                                                                                              >  1:531683/1‑150 (MQ=255)                                                      cACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATg                                                                                         >  1:1219895/1‑150 (MQ=255)                                                       aCTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑TAGCTTCTCTGATCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATgg                                                                                        <  1:285695/150‑1 (MQ=255)                                                       aCTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATgg                                                                                        >  2:570410/1‑150 (MQ=255)                                                         tGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAAttcttc                                                                                                                   <  2:47368/121‑1 (MQ=255)                                                         tGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAAttcttc                                                                                                                   >  1:47368/1‑121 (MQ=255)                                                           ggTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTgc                                                                                    <  2:734000/150‑1 (MQ=255)                                                                      tGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGaacaa                                                                         >  1:827668/1‑150 (MQ=255)                                                                         caccacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacagt                                                                                                            >  1:1010973/1‑112 (MQ=255)                                                                         caccacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGaacagt                                                                                                            <  2:1010973/112‑1 (MQ=255)                                                                         caccacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGtt                                                                                      >  2:1568190/1‑134 (MQ=255)                                                                         caccacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGtt                                                                                      <  1:1568190/134‑1 (MQ=255)                                                                         caccacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACgg                                                                      >  1:1044317/1‑150 (MQ=255)                                                                          accacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACggg                                                                     <  1:570410/150‑1 (MQ=255)                                                                           ccacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGc                                                                    >  2:852300/1‑150 (MQ=255)                                                                            cacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAAttctt                                                                                                                    <  2:1312373/101‑1 (MQ=255)                                                                            cacGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAAttctt                                                                                                                    >  1:1312373/1‑101 (MQ=255)                                                                             acGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAGCGGGCTg                                                                  >  1:561195/1‑150 (MQ=255)                                                                             acGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTg                                                                  >  2:1038017/1‑150 (MQ=255)                                                                              cgggggggCCGTGGGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGGTCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGAGCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTgg                                                                 <  2:124296/146‑1 (MQ=255)                                                                                ttGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGt                                                               <  2:1219895/150‑1 (MQ=255)                                                                                   gggTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGt                                                                                              <  2:1326927/116‑1 (MQ=255)                                                                                   gggTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGt                                                                                              >  1:1326927/1‑116 (MQ=255)                                                                                    ggTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCAGCGAACAACGGGCTGGGTTTGc                                                           >  2:690848/1‑150 (MQ=255)                                                                                    ggTCATGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTTTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGc                                                           <  1:276682/150‑1 (MQ=255)                                                                                        ttGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGtt                                                       >  2:1069624/1‑150 (MQ=255)                                                                                        ttGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGtt                                                       >  2:28522/1‑150 (MQ=255)                                                                                            gcgGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGc                                                           <  1:1386762/142‑1 (MQ=255)                                                                                            gcgGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGc                                                           >  2:1386762/1‑142 (MQ=255)                                                                                                      cgcCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAGCGGGCTGGGTTTGCCGTTGGTAGGATACTTGt                                         <  2:561195/150‑1 (MQ=255)                                                                                                      cgcCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGt                                         <  2:531683/150‑1 (MQ=255)                                                                                                       gcCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTc                                        <  1:83189/150‑1 (MQ=255)                                                                                                        ccGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTcc                                       >  2:226966/1‑150 (MQ=255)                                                                                                          gAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGa                                     <  1:967771/150‑1 (MQ=255)                                                                                                           gcgcaaccattcacccagcaactgttactgttcgaagaatTCGGGTC‑GAGCTTCTCTGAcc                                                                                                                             >  1:1409199‑M1/41‑61 (MQ=255)                                                                                                           gcgcaaccattcacccagcaactgttactgttcgaagaatTCGGGTC‑GAGCTTCTCTGAcc                                                                                                                             <  2:1409199‑M1/21‑1 (MQ=255)                                                                                                                  gTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGttt                                <  2:166240/147‑1 (MQ=255)                                                                                                                  gTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGttt                                >  1:166240/1‑147 (MQ=255)                                                                                                                     ccGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTgcaggg                          <  1:379400/150‑1 (MQ=255)                                                                                                                          aaGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGt                     <  1:384070/150‑1 (MQ=255)                                                                                                                             gTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTACTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGgc                  >  1:62023/1‑150 (MQ=255)                                                                                                                               actgttactgttcgaagaatTCGGGTCAGAGAAGCTC‑GACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGgcag                <  2:1516584‑M1/130‑1 (MQ=255)                                                                                                                                aGATCGGGCACCGGCGTGGTCGGCTA‑GATCTTCTCTTACCCTAATTCTTCGAACAGTAACAGTTGCTGAGTTAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGgcagc               <  1:690848/150‑1 (MQ=255)                                                                                                                                  aTCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCAc             <  2:474104/150‑1 (MQ=255)                                                                                                                                    cGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTgg                                                                 >  2:557274/1‑96 (MQ=255)                                                                                                                                    cGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTgg                                                                 <  1:557274/96‑1 (MQ=255)                                                                                                                                     gggCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGtt          <  1:1131365/150‑1 (MQ=255)                                                                                                                                        cACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTc       >  1:728598/1‑150 (MQ=255)                                                                                                                                        cACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTACTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACTTTGTc       <  2:62023/150‑1 (MQ=255)                                                                                                                                             gCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGc  <  1:1038017/150‑1 (MQ=255)                                                                                                                                             aagaatTCGGGTCAGAGAAGCTC‑GACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGc  <  2:190964‑M1/144‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GGTCGGGAACGGGTACAGGCCGGGTTGCTTGAGGAACGCTTCCAAAGCGCTGCCACTGGGTCCGCTGCGTGCCACCACGTTGGGGTCTTGCGCGGGGGCCGCGCCGAGGGTCGGTACCGGGAAGGTCAGATCGGGCACCGGCGTGGTCGGGTC‑GAGCTTCTCTGACCCGAATTCTTCGAACAGTAACAGTTGCTGGGTGAATGGTTGCGCACCGAACAACGGGCTGGGTTTGCCGTTGGTAGGATACTTGTCCGACGTTTGCAGGGCAGGTGGCAGCACGTTGTCGGTGC  >  NC_002947/3613172‑3613461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.